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Report for Sequence Feature Glyma.01g175100

Feature Type:gene_model
Chromosome:Gm01
Start:52274315
stop:52279289
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g175100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G50670.1AT U1-70K,U1SNRNP JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K11093KEGG Spliceosome JGI N/AIEA
KOG0113 KOG U1 small nuclear ribonucleoprotein (RRM superfamily) JGI N/AIEA
PTHR13952PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD JGI N/AIEA
PTHR13952:SF5PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF12220Pfam U1 small nuclear ribonucleoprotein of 70kDa MW N terminal JGI N/AIEA

Gene model name correspondences to Glyma.01g175100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g38120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g175100
>Glyma.01g175100.1 sequence-type=CDS polypeptide=Glyma.01g175100.1.p locus=Glyma.01g175100 id=Glyma.01g175100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGACAACAACAGCAACAACGATGCCTTCATGCGCAACCAAAACGCCGCCGTTCAGGCCCGCACCAAAGCGCAGAACCGTTCCAACGTCCTTCAGCTCAAACTGATTGGACAGAGTCACCCAACCGGTCTAACAGCGAACCTGTTGAAGCTCTTCGAGCCTAGGCCTCCGTTGGAGTACAAGCCGCCTCCGGAGAAACGGAAATGTCCACCGTTATCAGGGATGGCTCAATTTGTGAGCAAGTTTGCCCAGCCTGGCGATCCAGAATATGCTCCACCTGTCCCAGAAACCGAGACTCCTGCACAAAAAAGAGCCAGAATACACAAGCTAAGGCTAGAGAAAGGAGCTGCAAAGGCTGCTGAGGAGCTTGAGAAATATGATCCACATAATGACCCAAATGTGTCGGGAGATCCATACAAGACATTGTTTGTGGCTAAACTCAGTTACGAGACCACTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGGTTCGATTAGTTGCTGACAAAGATACAAATAAGCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTGTGGATGTTGAGCGTGGGAGGACTGTTCCAAATTGGAGACCTCGCCGCCTAGGTGGTGGGCTTGGTACTACTAGAGTTGGGGGTGAAGAAGTTAATCAGCGACATTCTGGGAGGGAGCAACAGCAGTCTCGTTCTGAAGAACCAAGAGTGCGGGAGGACCGACACAGTGATAGAGACAGGGAAATATCACGTGAAAGAGTTAGGGACAAAGACAAAGAACGGGAGCGATCACGTGAACATTCTAATGAAAGGGTCAGGGATCGCGATCAGAGAGAGGATAGGCACCACAGAGACCGAGATAGGACCAGGGACAGAGACAGGGAAAGAGATAGAGATAGAGATCGTGGACGTGATAGAGATAGAGCACGTGATCGTGAGCGAGGGAGGGACCGTGACCGGGATCGAGAATATGATCGACATCGTGAGAGGGATAGAGATTATGAAGTTGGCGAAACTGATCGAGGACGCTCACGTGATAGGGAGTCTCATTATAATCGTGTTGAATCTAAACATGGGGAAAGGAATCATGACTATGAGCCTGAGGATGATCGTGGTAGGCAAAACCAGTATGAGCATGGACATAGGCATGCAGACCCTGATCATGACACTACTGAGCATTATGACCCCTACAATCATGGAGATGATCGTGGTGACCATTACAATCAGTATCCTGACCCTGATAGGATGGAAGATGACTACCATGCAGGACGTGCAACATCTGAATCACATGAAAAGGAGAGAAGTCATGATGTGGACCGTGAATATCGGCGCTCAGAGAGATCACATTCCCGGGAGTATGATTATTAG

>Glyma.01g175100.3 sequence-type=CDS polypeptide=Glyma.01g175100.3.p locus=Glyma.01g175100 id=Glyma.01g175100.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGACAACAACAGCAACAACGATGCCTTCATGCGCAACCAAAACGCCGCCGTTCAGGCCCGCACCAAAGCGCAGAACCGTTCCAACGTCCTTCAGCTCAAACTGATTGGACAGAGTCACCCAACCGGTCTAACAGCGAACCTGTTGAAGCTCTTCGAGCCTAGGCCTCCGTTGGAGTACAAGCCGCCTCCGGAGAAACGGAAATGTCCACCGTTATCAGGGATGGCTCAATTTGTGAGCAAGTTTGCCCAGCCTGGCGATCCAGAATATGCTCCACCTGTCCCAGAAACCGAGACTCCTGCACAAAAAAGAGCCAGAATACACAAGCTAAGGCTAGAGAAAGGAGCTGCAAAGGCTGCTGAGGAGCTTGAGAAATATGATCCACATAATGACCCAAATGTGTCGGGAGATCCATACAAGACATTGTTTGTGGCTAAACTCAGTTACGAGACCACTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGGTTCGATTAGTTGCTGACAAAGATACAAATAAGCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTGTGGATGTTGAGCGTGGGAGGACTGTTCCAAATTGGAGACCTCGCCGCCTAGGTGGTGGGCTTGGTACTACTAGAGTTGGGGGTGAAGAAGTTAATCAGCGACATTCTGGGAGGGAGCAACAGCAGTCTCGTTCTGAAGAACCAAGAGTGCGGGAGGACCGACACAGTGATAGATCATTTAGAGACAGGGAAATATCACGTGAAAGAGTTAGGGACAAAGACAAAGAACGGGAGCGATCACGTGAACATTCTAATGAAAGGGTCAGGGATCGCGATCAGAGAGAGGATAGGCACCACAGAGACCGAGATAGGACCAGGGACAGAGACAGGGAAAGAGATAGAGATAGAGATCGTGGACGTGATAGAGATAGAGCACGTGATCGTGAGCGAGGGAGGGACCGTGACCGGGATCGAGAATATGATCGACATCGTGAGAGGGATAGAGATTATGAAGTTGGCGAAACTGATCGAGGACGCTCACGTGATAGGGAGTCTCATTATAATCGTGTTGAATCTAAACATGGGGAAAGGAATCATGACTATGAGCCTGAGGATGATCGTGGTAGGCAAAACCAGTATGAGCATGGACATAGGCATGCAGACCCTGATCATGACACTACTGAGCATTATGACCCCTACAATCATGGAGATGATCGTGGTGACCATTACAATCAGTATCCTGACCCTGATAGGATGGAAGATGACTACCATGCAGGACGTGCAACATCTGAATCACATGAAAAGGAGAGAAGTCATGATGTGGACCGTGAATATCGGCGCTCAGAGAGATCACATTCCCGGGAGTATGATTATTAG

>Glyma.01g175100.4 sequence-type=CDS polypeptide=Glyma.01g175100.4.p locus=Glyma.01g175100 id=Glyma.01g175100.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGACAACAACAGCAACAACGATGCCTTCATGCGCAACCAAAACGCCGCCGTTCAGGCCCGCACCAAAGCGCAGAACCGTTCCAACGTCCTTCAGCTCAAACTGATTGGACAGAGTCACCCAACCGGTCTAACAGCGAACCTGTTGAAGCTCTTCGAGCCTAGGCCTCCGTTGGAGTACAAGCCGCCTCCGGAGAAACGGAAATGTCCACCGTTATCAGGGATGGCTCAATTTGTGAGCAAGTTTGCCCAGCCTGGCGATCCAGAATATGCTCCACCTGTCCCAGAAACCGAGACTCCTGCACAAAAAAGAGCCAGAATACACAAGCTAAGGCTAGAGAAAGGAGCTGCAAAGGCTGCTGAGGAGCTTGAGAAATATGATCCACATAATGACCCAAATGTGTCGGGAGATCCATACAAGACATTGTTTGTGGCTAAACTCAGTTACGAGACCACTGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGGTTCGATTAGTTGCTGACAAAGATACAAATAAGCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTGTGGATGTTGAGCGTGGGAGGACTGTTCCAAATTGGAGACCTCGCCGCCTAGGTGGTGGGCTTGGTACTACTAGAGTTGGGGGTGAAGAAGTTAATCAGCGACATTCTGGGAGGGAGCAACAGCAGTCTCGTTCTGAAGAACCAAGAGTGCGGGAGGACCGACACAGTGATAGGGAAATATCACGTGAAAGAGTTAGGGACAAAGACAAAGAACGGGAGCGATCACGTGAACATTCTAATGAAAGGGTCAGGGATCGCGATCAGAGAGAGGATAGGCACCACAGAGACCGAGATAGGACCAGGGACAGAGACAGGGAAAGAGATAGAGATAGAGATCGTGGACGTGATAGAGATAGAGCACGTGATCGTGAGCGAGGGAGGGACCGTGACCGGGATCGAGAATATGATCGACATCGTGAGAGGGATAGAGATTATGAAGTTGGCGAAACTGATCGAGGACGCTCACGTGATAGGGAGTCTCATTATAATCGTGTTGAATCTAAACATGGGGAAAGGAATCATGACTATGAGCCTGAGGATGATCGTGGTAGGCAAAACCAGTATGAGCATGGACATAGGCATGCAGACCCTGATCATGACACTACTGAGCATTATGACCCCTACAATCATGGAGATGATCGTGGTGACCATTACAATCAGTATCCTGACCCTGATAGGATGGAAGATGACTACCATGCAGGACGTGCAACATCTGAATCACATGAAAAGGAGAGAAGTCATGATGTGGACCGTGAATATCGGCGCTCAGAGAGATCACATTCCCGGGAGTATGATTATTAG
Predicted protein sequences of Glyma.01g175100
>Glyma.01g175100.1.p sequence-type=predicted peptide transcript=Glyma.01g175100.1 locus=Glyma.01g175100 id=Glyma.01g175100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLSGMAQFVSKFAQPGDPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEPRVREDRHSDRDREISRERVRDKDKERERSREHSNERVRDRDQREDRHHRDRDRTRDRDRERDRDRDRGRDRDRARDRERGRDRDRDREYDRHRERDRDYEVGETDRGRSRDRESHYNRVESKHGERNHDYEPEDDRGRQNQYEHGHRHADPDHDTTEHYDPYNHGDDRGDHYNQYPDPDRMEDDYHAGRATSESHEKERSHDVDREYRRSERSHSREYDY*

>Glyma.01g175100.3.p sequence-type=predicted peptide transcript=Glyma.01g175100.3 locus=Glyma.01g175100 id=Glyma.01g175100.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLSGMAQFVSKFAQPGDPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEPRVREDRHSDRSFRDREISRERVRDKDKERERSREHSNERVRDRDQREDRHHRDRDRTRDRDRERDRDRDRGRDRDRARDRERGRDRDRDREYDRHRERDRDYEVGETDRGRSRDRESHYNRVESKHGERNHDYEPEDDRGRQNQYEHGHRHADPDHDTTEHYDPYNHGDDRGDHYNQYPDPDRMEDDYHAGRATSESHEKERSHDVDREYRRSERSHSREYDY*

>Glyma.01g175100.4.p sequence-type=predicted peptide transcript=Glyma.01g175100.4 locus=Glyma.01g175100 id=Glyma.01g175100.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLSGMAQFVSKFAQPGDPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEPRVREDRHSDREISRERVRDKDKERERSREHSNERVRDRDQREDRHHRDRDRTRDRDRERDRDRDRGRDRDRARDRERGRDRDRDREYDRHRERDRDYEVGETDRGRSRDRESHYNRVESKHGERNHDYEPEDDRGRQNQYEHGHRHADPDHDTTEHYDPYNHGDDRGDHYNQYPDPDRMEDDYHAGRATSESHEKERSHDVDREYRRSERSHSREYDY*






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