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Report for Sequence Feature Glyma.01g173100

Feature Type:gene_model
Chromosome:Gm01
Start:52148752
stop:52150582
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g173100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G18260.1AT ATSYP112,SYP112 JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K08486KEGG Exosome JGI N/AIEA
KOG0810 KOG SNARE protein Syntaxin 1 and related proteins JGI N/AIEA
PTHR19957PantherFam SYNTAXIN JGI N/AIEA
PTHR19957:SF123PantherFam SYNTAXIN-112 JGI N/AIEA
PF00804Pfam Syntaxin JGI N/AIEA
PF05739Pfam SNARE domain JGI N/AIEA

Gene model name correspondences to Glyma.01g173100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g37880 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g173100
>Glyma.01g173100.2 sequence-type=CDS polypeptide=Glyma.01g173100.2.p locus=Glyma.01g173100 id=Glyma.01g173100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATGATTTGATGACAAAGTCGTTCCTAAGTTATGTGGAACTAAAGAAACAGGCTCGCAAGGACCTTGAAGACGACGATCTTGACCTTGAAGCAGGGAAACTCAACCCCACGGAAGACCGCAACCTCTCTCAGTTCTTCCAAGAAGTTGAAGCAATCAAGGTTGAAATGGAAGAGATCTCCAATCTCTTATTTGATCTTCAGCAACTAAATGAAGAGGCAAAGTGCACCCACGGTGCCAAAGTTCTCCGTGGCCTAAGGGACCGGATGGAGTCCGACATGGTTGCCGTGCTTCGCAAGGCACGGACCATCAAGGCAATGCTTGAGGTTCTTGACCAATCCAACATAGCCAATCGTAGTTTGTCAGAATCCTACAAAGAGGGGAGCCCCATTGACAGGACCAGAATGTCTGTCACAAATGGTTTGAGGGTCAAGCTTAGGGACATGATGAATGACTTTCTGTCCTTGAGGGACAAGATTCTATCTGATCACAAGGAAGATTTGAAGAGAAGGTACTATACCGCGACTGGTGAGGTTCCTACTGAGGAGGTCATGGAGAAGATGGTTTCTGGGAGTCTCAAAGTTGAGTTTCTGGCTGGGAAAACGGATGCTGATTTGGGCACTCAGGTTAGGCATGAGGCAGTGATGGATATCCAGAGGAGTTTGAATAAGCTTCACCAAGTTTTTCTTGATATGGCTATTCTGGTTGAGACACAAGGAGAAAAGTTGGATAACATTGAGGATAATGTGGTTAATGCTGGTAACTTTATCCATGGTGGGACTAATAGTCTTTACTATGCCGACCAGATGAAGAAGAAGAACAGAAAATGGTTGTGTTGGGTTTTTGCTGTGGGGCTGATTATACTACTCGTATGCATCATTGCAATGTTGTCTTCTTGA

>Glyma.01g173100.3 sequence-type=CDS polypeptide=Glyma.01g173100.3.p locus=Glyma.01g173100 id=Glyma.01g173100.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATGATTTGATGACAAAGTCGTTCCTAAGTTATGTGGAACTAAAGAAACAGGCTCGCAAGGACCTTGAAGACGACGATCTTGACCTTGAAGCAGGGAAACTCAACCCCACGGAAGACCGCAACCTCTCTCAGTTCTTCCAAGAAGTTGAAGCAATCAAGGTTGAAATGGAAGAGATCTCCAATCTCTTATTTGATCTTCAGCAACTAAATGAAGAGGCAAAGTGCACCCACGGTGCCAAAGTTCTCCGTGGCCTAAGGGACCGGATGGAGTCCGACATGGTTGCCGTGCTTCGCAAGGCACGGACCATCAAGGCAATGCTTGAGGTTCTTGACCAATCCAACATAGCCAATCGTAGTTTGTCAGAATCCTACAAAGAGGGGAGCCCCATTGACAGGACCAGAATGTCTGTCACAAATGGTTTGAGGGTCAAGCTTAGGGACATGATGAATGACTTTCTGTCCTTGAGGGACAAGATTCTATCTGATCACAAGGAAGATTTGAAGAGAAGGTACTATACCGCGACTGGTGAGGTTCCTACTGAGGAGGTCATGGAGAAGATGGTTTCTGGGAGTCTCAAAGTTGAGTTTCTGGCTGGGAAAACGGATGCTGATTTGGGCACTCAGGTTAGGCATGAGGCAGTGATGGATATCCAGAGGAGTTTGAATAAGCTTCACCAAGTTTTTCTTGATATGGCTATTCTGGTTGAGACACAAGGAGAAAAGTTGGATAACATTGAGGATAATGTGGTTAATGCTGGTAACTTTATCCATGGTGGGACTAATAGTCTTTACTATGCCGACCAGATGAAGAAGAAGAACAGAAAATGGTTGTGTTGGGTTTTTGCTGTGGGGCTGATTATACTACTCGTATGCATCATTGCAATGTTGTCTTCTTGA
Predicted protein sequences of Glyma.01g173100
>Glyma.01g173100.2.p sequence-type=predicted peptide transcript=Glyma.01g173100.2 locus=Glyma.01g173100 id=Glyma.01g173100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNDLMTKSFLSYVELKKQARKDLEDDDLDLEAGKLNPTEDRNLSQFFQEVEAIKVEMEEISNLLFDLQQLNEEAKCTHGAKVLRGLRDRMESDMVAVLRKARTIKAMLEVLDQSNIANRSLSESYKEGSPIDRTRMSVTNGLRVKLRDMMNDFLSLRDKILSDHKEDLKRRYYTATGEVPTEEVMEKMVSGSLKVEFLAGKTDADLGTQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKLDNIEDNVVNAGNFIHGGTNSLYYADQMKKKNRKWLCWVFAVGLIILLVCIIAMLSS*

>Glyma.01g173100.3.p sequence-type=predicted peptide transcript=Glyma.01g173100.3 locus=Glyma.01g173100 id=Glyma.01g173100.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNDLMTKSFLSYVELKKQARKDLEDDDLDLEAGKLNPTEDRNLSQFFQEVEAIKVEMEEISNLLFDLQQLNEEAKCTHGAKVLRGLRDRMESDMVAVLRKARTIKAMLEVLDQSNIANRSLSESYKEGSPIDRTRMSVTNGLRVKLRDMMNDFLSLRDKILSDHKEDLKRRYYTATGEVPTEEVMEKMVSGSLKVEFLAGKTDADLGTQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKLDNIEDNVVNAGNFIHGGTNSLYYADQMKKKNRKWLCWVFAVGLIILLVCIIAMLSS*






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