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Report for Sequence Feature Glyma.01g162000

Feature Type:gene_model
Chromosome:Gm01
Start:51113295
stop:51116287
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g162000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35785.2AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K12897KEGG Spliceosome JGI N/AIEA
KOG0107 KOG Alternative splicing factor SRp20/9G8 (RRM superfamily) JGI N/AIEA
KOG0121 KOG Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) JGI N/AIEA
PTHR15241PantherFam TRANSFORMER-2-RELATED JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.01g162000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g36670 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g162000
>Glyma.01g162000.1 sequence-type=CDS polypeptide=Glyma.01g162000.1.p locus=Glyma.01g162000 id=Glyma.01g162000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGATTCTCCACCGAGAAGGAATTCAAGGTCCCCTTCCCCATGGAGGGCTGAGTCAAGGTCTAGGTCAAGGTCTAGATCTAGGCCTAGGTCTAGGTCCCGGTCAAGATCTTTTGAGAAACAAAGGCCAAGATCCCGGTCGAGAAGTCGTGGAAGATCAAGATCAAGAAGTAACGAAAGGTCTGAGGCTAAAAATGCTGGAACTACACTTTATGTGACTGGCCTGTCTTCAAGGGTCACTGAGAGAGACCTAGAGGAGCATTTCTCTAAGGAGGGAAAGGTTGCTTCGTGCTTTCTTGTGGTGGAGCCGCGGACACGAATTTCTCGTGGTTTTGCTTTTATTACAATGGATACTGTTGAGGATGCGAACCGTTGCATCAAATATCTCAATCAATCAGTTTTAGAGGGTCGCTATATTACTGTTGAGCGGTCACGAAGAAAGCGGCCAAGAACTCCTACACCTGGACACTATCTTGGCCTTAAAAGTACTAGAGACTATGGGCATCGTGGTGACCATGGAAGGTATCGAGGAGGTGGATCTGGTCATGATGATTATGGATATCGTGGTGACCGTGGAAGGTCTCCAAGGCACTCACCACCATATCGAGGTGGTAGAGATTATTCACCGAGGCACTCACCCCCACCTTATGGTGGAAGATCTAGGAGGGACAGGTCCAGGTCACTTCCTTATTCTCCATATGGTAGCCCAGATAGGAGGTATGCTCGTGGATCTAGGTGA
Predicted protein sequences of Glyma.01g162000
>Glyma.01g162000.1.p sequence-type=predicted peptide transcript=Glyma.01g162000.1 locus=Glyma.01g162000 id=Glyma.01g162000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADSPPRRNSRSPSPWRAESRSRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRSRSNERSEAKNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTVEDANRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSTRDYGHRGDHGRYRGGGSGHDDYGYRGDRGRSPRHSPPYRGGRDYSPRHSPPPYGGRSRRDRSRSLPYSPYGSPDRRYARGSR*






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