SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g159900

Feature Type:gene_model
Chromosome:Gm01
Start:50949274
stop:50959406
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g159900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G66030.1AT ATGRIP,GRIP JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG0978 KOG E3 ubiquitin ligase involved in syntaxin degradation JGI N/AIEA
KOG0993 KOG Rab5 GTPase effector Rabaptin-5 JGI N/AIEA
KOG4687 KOG Uncharacterized coiled-coil protein JGI N/AIEA
PTHR23160PantherFam SYNAPTONEMAL COMPLEX PROTEIN-RELATED JGI N/AIEA
PF01465Pfam GRIP domain JGI N/AIEA

Gene model name correspondences to Glyma.01g159900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g36450 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g159900
>Glyma.01g159900.1 sequence-type=CDS polypeptide=Glyma.01g159900.1.p locus=Glyma.01g159900 id=Glyma.01g159900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGGATACTCACGCAGAAGATTCTGCTAGATCTGAGGAGAATTTTCCTGATGTGACTCATCATAATGAAGATGGAAGCAACGGAAATCTTATATTGGAAAATGGTTTGTCTGATGGCAATCAAGGTCCTGCTGATACTCATGATCAGCTTCTACAAATGGTTATGGACCTCAGGTTTCAGAATGACTTCTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAGACAGTGTACATAGTGACTCTAATATACAGAAAGGAGTTGGTGGCTTGGAAGATGGGGAATCTGACATTGTGAAAGAACTAAAGGATAAGATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCAGAAGAGGCTTTGAAGCATCTTCAAACGGCTTACTCAGAGGCAGAAGCAAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTAGACCAAGAAGTAAAAGAGCGTGAAGAGAAGTACCTTGAACTTGATTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAGTTCAAAAGGAAAAAGATGATCTTGAGGCCCGCTTCTCTGAGGTGAATGAAATTGCAGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGTTGACAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAGTGCTATTGAGGCATTGCAACAATCAGTTGTAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCGGCACTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATACAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCTGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCGGCATCAACAGGAGAAGCTGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTTCTCACCTAAAAGAGGAGCATGAAAAAGAAAGGGAAAGCTGGGAGACTGCTTCTCAGGCACTTAAAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCACCCAAACAAGAATCCTCAATATGAGAGATGCCGAATTGTTGGCTGCCAAAGAAGAGATCAGCTCTCTTGAGAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAGCTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTAGAGGAAACTCTGAGAGAGGTGGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAGATTGCAGAAAGAGACACAGCCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTTGAAATAAAGCTTGACTCAGCTAATGTTAAACACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAGATGCGAGGCAATGAAGGCTGAAAATGAAGCTACTGCTACAAAAGATATGCAAAAGGAATTGGAAGAGTTCAAACAGCGATGTAAAAAACTGAAGGAAGAACATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTATAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCACCAGTCGATCAGAATGATAATTATACAACAGCCATGCATAAATTGGATTCAACAAATTTAAGCCCCTCAGCAGCAGAACAGCAAATTCTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACTGTCACAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGAGGCAATGTTAAAGGATGAGCTTCGCAGTATGGAAAGATCAAAGAAAAGGGAAGGTGTTGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATACAGAAGTGTCAACAGGCATATCACAACTCCACAGATGTTCCACCACCAAATCCTGCAAGCGATACTTCAGGATCTGGCCTATCGCTTTTCTCAAGATTCACATTTTCTTAA
Predicted protein sequences of Glyma.01g159900
>Glyma.01g159900.1.p sequence-type=predicted peptide transcript=Glyma.01g159900.1 locus=Glyma.01g159900 id=Glyma.01g159900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMDTHAEDSARSEENFPDVTHHNEDGSNGNLILENGLSDGNQGPADTHDQLLQMVMDLRFQNDFLKSQFEGFKNVDSVHSDSNIQKGVGGLEDGESDIVKELKDKIQLLNKEFLEEKQTRIASEEALKHLQTAYSEAEAKAQELSEKLAEAQTKLDQEVKEREEKYLELDSKFNRLHKRAKQRIQEVQKEKDDLEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDVDRQQLRSANNNLRDTIEDLRRSLQPKESAIEALQQSVVEKEQMLEDMRGLLQAAEEKRQAALAELSAKHQKNIQSLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELSHLKEEHEKERESWETASQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSTQTRILNMRDAELLAAKEEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLREVENEVLSITEERDRVLQDLQSAMANHEKEIAERDTALENVKQQIRSFEIKLDSANVKHLKEKEEWGLSLQNVEETWRIRCEAMKAENEATATKDMQKELEEFKQRCKKLKEEHASFHDLADRMIEEKDYEISRLIDENKNLRQSLQSRPPVDQNDNYTTAMHKLDSTNLSPSAAEQQILILARQQAQREEELALSQRHILALQEEIEELERENRLHSQQEAMLKDELRSMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHNSTDVPPPNPASDTSGSGLSLFSRFTFS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo