SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g154100

Feature Type:gene_model
Chromosome:Gm01
Start:50243689
stop:50246809
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g154100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G45360.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR22990PantherFam F-BOX ONLY PROTEIN JGI N/AIEA
PF03048Pfam UL92 family JGI N/AIEA
PF12937Pfam F-box-like JGI N/AIEA

Gene model name correspondences to Glyma.01g154100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g35750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g154100
>Glyma.01g154100.1 sequence-type=CDS polypeptide=Glyma.01g154100.1.p locus=Glyma.01g154100 id=Glyma.01g154100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTCTTTCGGACGACGAGGACGAGAATCTGGCTCAATTTCTGGAATCAGAAGTCCTCTCGGAGGTATCTGACAAGGAAGAGGAAAATGTGGAGGAACCGAAAGCAAAGAGAGCGCGCTTAGAAGAGGATGAGATTACTAAGCAAAAACAAAGTTCTGATTCATTATCTGCGCCGAAGAACATTGTTGTCAACAACGGGGTGGTGCCCAGAAGGATTGAGACTGGTTATTTCAGTCAAATTCCACCGGAGCTTTTCCATCACATCCTTAAATTTCTGTCCTCCGAGGACCTTGTTTCTTGTTCCTTAGTTTGTAGGTTCTTGAATTATGCTGCATCAGATGAGGCATTATGGCGTCGCTTGTACTGTATGCGATGGGGCATGCTTCCCCCTACAAGGAAGTTAAGGGAATGCCCGTGGAAAATGTTATACATTCAGCGTGATGGAGAGGACATGGTTGAACTTGTTAGAAGCTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCACCTCATCCTTCACAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTCAGTGATACAGTGGTGACTGATCATGCTTGTTCTGGGGAAACGTGCTCTTACTACCATATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGTTTGTGACGATACATGTAGAGAAGTAGTTATGGATCCCACAAACGAGCTTTTGGTCTGTACAATATCGGGGCACTGTTTTGATAGATTATTGTCACCTTCGGAAATGGAGCCTGATACTGAGCAGCAGCAAGGTGGTGTGACTGATGAGGCCGAGCCATTTATGGGATCTGGCCGTTTTGCACGAGCTTATTCACTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACATTGAGGTTTTGCTGA

>Glyma.01g154100.2 sequence-type=CDS polypeptide=Glyma.01g154100.2.p locus=Glyma.01g154100 id=Glyma.01g154100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTCTTTCGGACGACGAGGACGAGAATCTGGCTCAATTTCTGGAATCAGAAGTCCTCTCGGAGGTATCTGACAAGGAAGAGGAAAATGTGGAGGAACCGAAAGCAAAGAGAGCGCGCTTAGAAGAGGATGAGATTACTAAGCAAAAACAAAGTTCTGATTCATTATCTGCGCCGAAGAACATTGTTGTCAACAACGGGGTGGTGCCCAGAAGGATTGAGACTGGTTATTTCAGTCAAATTCCACCGGAGCTTTTCCATCACATCCTTAAATTTCTGTCCTCCGAGGACCTTGTTTCTTGTTCCTTAGTTTGTAGGTTCTTGAATTATGCTGCATCAGATGAGGCATTATGGCGTCGCTTGTACTGTATGCGATGGGGCATGCTTCCCCCTACAAGGAAGTTAAGGGAATGCCCGTGGAAAATGTTATACATTCAGCGTGATGGAGAGGACATGGTTGAACTTGTTAGAAGCTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCACCTCATCCTTCACAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTCAGTGATACAGTGGTGACTGATCATGCTTGTTCTGGGGAAACGTGCTCTTACTACCATATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGGAGCAGCAGCAAGGTGGTGTGACTGA
Predicted protein sequences of Glyma.01g154100
>Glyma.01g154100.1.p sequence-type=predicted peptide transcript=Glyma.01g154100.1 locus=Glyma.01g154100 id=Glyma.01g154100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTLSDDEDENLAQFLESEVLSEVSDKEEENVEEPKAKRARLEEDEITKQKQSSDSLSAPKNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVCDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTDEAEPFMGSGRFARAYSLGYNCADEKELEATLRFC*

>Glyma.01g154100.2.p sequence-type=predicted peptide transcript=Glyma.01g154100.2 locus=Glyma.01g154100 id=Glyma.01g154100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTLSDDEDENLAQFLESEVLSEVSDKEEENVEEPKAKRARLEEDEITKQKQSSDSLSAPKNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHGAAARWCD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo