SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g153500

Feature Type:gene_model
Chromosome:Gm01
Start:50203257
stop:50204050
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g153500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATCG00270.1AT JGI N/AIEA
1.10.3.9EC photosystem II JGI N/AIEA
GO:0009772GO-bp photosynthetic electron transport in photosystem II JGI N/AIEA
GO:0019684GO-bp photosynthesis, light reaction JGI N/AIEA
GO:0045156GO-mf electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity JGI N/AIEA
K02705KEGG Photosynthesis proteins JGI N/AIEA
K02706KEGG Photosynthesis proteins JGI N/AIEA
PTHR33149PantherFam PHOTOSYSTEM II PROTEIN D1 JGI N/AIEA
PF00124Pfam Photosynthetic reaction centre protein JGI N/AIEA

Gene model name correspondences to Glyma.01g153500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g35681 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g153500
>Glyma.01g153500.1 sequence-type=CDS polypeptide=Glyma.01g153500.1.p locus=Glyma.01g153500 id=Glyma.01g153500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTATAGCTCTTGGTAAATTTACCAAAGATGAAAATGATTTATTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCATTTTTGTGGGTTGGTCCGGTCTATTACTCTTCCCTTGCGCCTATTTTGCCTTGGGGGGTTGTTCTTATTTGGAAGGCTGTAACTTCTTAATTGCTGCAGTCTCCACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAATTAGATGGTCAGTGGACTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGGTCTTATAATGCAATCACATTCTCTAGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACCGGGTCAGTCTGGTTGTTTCTTTGCTCCTAGTTTTGGTGTAGTAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCGACATTACTATGTGTTATTCATGGTGCCACCGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTAAAGAAACTTATTCAATATTACTCATCACAATGCATACCATTATCTCCCATTTTTTGATATGGACTCTCTATTCATAA
Predicted protein sequences of Glyma.01g153500
>Glyma.01g153500.1.p sequence-type=predicted peptide transcript=Glyma.01g153500.1 locus=Glyma.01g153500 id=Glyma.01g153500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTIALGKFTKDENDLFDIMDDWLRRDRFIFVGWSGLLLFPCAYFALGGCSYLEGCNFLIAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLDGQWTFVALHGAFALIGFMLRQFELARSVQLRSYNAITFSSPIAVFVFVFLIYPPGQSGCFFAPSFGVVAIFRFILFFQGFHNWTLNPFHMMGVAGVLGATLLCVIHGATVENTLFEDGDGANTFRAFNPTQAKETYSILLITMHTIISHFLIWTLYS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo