SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g147400

Feature Type:gene_model
Chromosome:Gm01
Start:49497102
stop:49500655
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g147400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G20020.1AT ATCAF1,CAF1 JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
PTHR31846PantherFam CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF01985Pfam CRS1 / YhbY (CRM) domain JGI N/AIEA

Gene model name correspondences to Glyma.01g147400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g34980 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g147400
>Glyma.01g147400.2 sequence-type=CDS polypeptide=Glyma.01g147400.2.p locus=Glyma.01g147400 id=Glyma.01g147400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATGTGCTTCTGAAGGTGGCAATCCAATTACCCATATTTTCTCCACCCGTTTGCCCGAACCCGACTCGCGATCGTTGTTCCACGGAGCTCCGTTTCTCGCGCTGGAACAACGCCAACGCCGAGAAGTTCAACCGGCGCCGCCGAACTATCCAGGAAATCGAAGACGAAATCTGCCGCACTCGCCGCTTCACGGCCGCCGACAACATCACCAACACCGCTTTCGCCGCCGATTCCGCCGCAGCCGCCGAAACGTTCAAATCCCTCGGAACTCCCTCCGCCCCGTCACAACCTTCAATTCCGGGGAAGAAATCGAAGTACTCCAAGCCGCCGCCGAAGCCGAAACCCTTACTCGATTCGCACCCCGTGGTTTCGCGAGCCGCGAGCCTCGAATTTCGGCCGGGACCGGAGAACGTCAGAATCGGCGACGACGGAGTTTCCTACGTCGTCGACGGCGCGCCGTTCGAGTTTAGGTTCAGTTACACTGAGACTCCGAATGCGAAGCCGGTGAAATTGCGCGAGCCGCCATTCGCGCCGTTCGGACCGGCCTCCTTGCCGCGGCCATGGACGGGGCGGAACCCGGTGCCCCCGAGCAAGACGACGGTGAAGGACTTCCACGCGCTGGCTCTGCCGCCGCCGGATGAGGAAGAGGTTCAACCGGTTCGGTTGGCCGGTCCGGTTTGGGAGTCGAGAGATGAGGTATTGGGAGAACCGTTGACTAAGGACGAAATCAATCGCTTGATTAAAGCCACAGAGAAATCTTCGCGCCAGCTTAACATTGGCAGGGATGGTTTGACACATAACATGTTGGAAAATATACATACTTATTGGATGCGGCGTAGTGCGTGCAAGATAAAGTGCAGAGGAGTGTGTACTGTGGATATGGATAATGTGTGCCAGCAGTTAGAGGAAAGGACTGGAGGAAAAATCATTTACAGACAGGCTGGCACAGTGTACCTTTTCCGGGGCAAAAACTACAACTATGAAACTCGTCCACGATTTCCTTTCATGCGGTGGAAACCGGTGTCTCCAGTATATCCTAGGCTAATTAAACGAGTTCCAGAAGGTCTAACACTTGAAAAAGCAACTGAAATGCGTCAAAAGGGAAGGGACTTAATGCCCATATGCAAGCTAGGAAAAAATGGTGTTTACTGGGACCTTGTGACTAATATCAGAGAGGCATTTGAAGAGTGTGAGCTTGTGCGAATAAATTGCCAGGAACTAAATACAAGTGACTATCGAAGGATTGGAGCAAAACTAAAGGATCTTGTGCCATGCGCACTGCTTTCATTTGAAAATGACCACATACTTATGTGGAGGGGACAAAATTGGAGGCCCTCTTTACCAGATCCCAGAGATGATGACAAGGAAGCCAATAAAATTAATGTTGACAATGGAAATTCCAATAAACTGCCTTCAGATGCCCAAGAATTGTCAGCATTGTGTCTACAGAATAATCCAGTAGAGAATCTAAGCAATGAACCTCTTGACATAAGCATTTTATCTAATTCAGATGATGTGAGTTTGTACAAGGCTGTGTCTTGTCCCACAGAAAATAGCAACCAACTGGTGTCTGTGGTTACTGATGCTGCTTCACTTTCTATGAAATCCTGTGAAGCTGAAACTACAGAAGATGCCATGGTCGCTTCTTGCGAGCCACAAATGTTGCCTGGAACTAATAACAATTCTGTGAGTAACATAGTAGATCCTTATTCTGACAAGTTTCCAGGAGCAGCAGATGTTAGTGAGACCTCAAGATCTGCACTCTGCACGGAAGGAATTTTATCACTGTTGGAGCAAGCTGTTGAGAAAGGCAGTGCACTAGTTTTAGACGATGAATTTTTGGATGATGACCTCCTTTATCAAACCACAGTGGCTTTTGCTAAATCAACTCCACCCGAGCCTGTTTATAAGCTACCTAAACAGGTTGTCATTGTAAAAAGTGAGAGGCAAGAAGGTTTAACGCTGGAGACAGAAGAAATTACCAGTGTTACAAGGATAGGTGAAAAAATGAATAAGAGTTCTAAAATTAGAAGAAAAGAATATGGTAGGGGATCTCTGAATGTATTAGTACCACATAGAACGATAAACGTAGATAAACTTGCAATTCTGAAATGA
Predicted protein sequences of Glyma.01g147400
>Glyma.01g147400.2.p sequence-type=predicted peptide transcript=Glyma.01g147400.2 locus=Glyma.01g147400 id=Glyma.01g147400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDVLLKVAIQLPIFSPPVCPNPTRDRCSTELRFSRWNNANAEKFNRRRRTIQEIEDEICRTRRFTAADNITNTAFAADSAAAAETFKSLGTPSAPSQPSIPGKKSKYSKPPPKPKPLLDSHPVVSRAASLEFRPGPENVRIGDDGVSYVVDGAPFEFRFSYTETPNAKPVKLREPPFAPFGPASLPRPWTGRNPVPPSKTTVKDFHALALPPPDEEEVQPVRLAGPVWESRDEVLGEPLTKDEINRLIKATEKSSRQLNIGRDGLTHNMLENIHTYWMRRSACKIKCRGVCTVDMDNVCQQLEERTGGKIIYRQAGTVYLFRGKNYNYETRPRFPFMRWKPVSPVYPRLIKRVPEGLTLEKATEMRQKGRDLMPICKLGKNGVYWDLVTNIREAFEECELVRINCQELNTSDYRRIGAKLKDLVPCALLSFENDHILMWRGQNWRPSLPDPRDDDKEANKINVDNGNSNKLPSDAQELSALCLQNNPVENLSNEPLDISILSNSDDVSLYKAVSCPTENSNQLVSVVTDAASLSMKSCEAETTEDAMVASCEPQMLPGTNNNSVSNIVDPYSDKFPGAADVSETSRSALCTEGILSLLEQAVEKGSALVLDDEFLDDDLLYQTTVAFAKSTPPEPVYKLPKQVVIVKSERQEGLTLETEEITSVTRIGEKMNKSSKIRRKEYGRGSLNVLVPHRTINVDKLAILK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo