SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g145400

Feature Type:gene_model
Chromosome:Gm01
Start:49122030
stop:49128893
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g145400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29060.1AT emb2726 JGI N/AIEA
GO:0006414GO-bp translational elongation JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003746GO-mf translation elongation factor activity JGI N/AIEA
KOG1071 KOG Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt JGI N/AIEA
PTHR11741PantherFam ELONGATION FACTOR TS JGI N/AIEA
PF00575Pfam S1 RNA binding domain JGI N/AIEA
PF00889Pfam Elongation factor TS JGI N/AIEA

Gene model name correspondences to Glyma.01g145400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g34700 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g145400
>Glyma.01g145400.1 sequence-type=CDS polypeptide=Glyma.01g145400.1.p locus=Glyma.01g145400 id=Glyma.01g145400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATCCTGTAATACCATGCTCTATTGGCAATGTTTCAATTATTCCTGTATTCATCTATTCAACAAGGAAGAATAACACTTTAACAAGATTCAACTTGTCAAGGAGCACTGTAAAACCTGGATCATCATCTTGGAGATTTCTATTACCTTCATTTGTTGCCAGTGGAGCGTTTCCACAAAACAAAGGAATACGCTCTTTTCATAAGAAATCTAGCACCTCCATATCAGCCACAGAAACAGATGTAACAGTGGAGGAACCAAGTCCTGTTGCTGATGAAGATTCTGGTGAAATTACTTCAAATGAAGTTGGAATTAGTGAAGATTCATCTTCTAAGTCTGATGCCAACCCTGATCCAGCTAAAGGTAGACGTTCAAGACCTGCAAGGAAAAGTGAGATGCCTCCTGTAAAGAATGAGGATTTGATACCTGGGGCAACTTTTACTGGGAAAGTGAAATCTGTCCAGCCATTTGGTGCCTTCGTTGATATTGGTGCTTTCACAGATGGGCTTGTTCATATTTCGATGTTGAGTGATAGCTATGTTAAGGATGTTACAAGTGTTGTTTCTGTAGGTCAAGAAGTGAAGGTGAAGCTGATTGAAGTGAATACTGAAACTCAGCGTATTTCTCTCTCTATGCGTGAAAATGCTGACACTGGTAAGCAGCGTAAAGATGCACCTGTCAAGACAGAGAAAGCTGGACCTGGGAAGAGGAACAGTTCAAAACCCAGTTCAAAGAAAGATAATGTGACGAAAAGCACCAAATTTGCCATAGGGCAGCAACTGGTTGGTTCAGTGAAGAATTTGGCTAGGAGTGGTGCTTTTATATCTCTTCCTGAAGGGGAGGAAGGATTTCTACCTGTATCTGAGGAACCTGATGATGGATTTGATAATGTTATGGGGAACACTACGCTGGAAGTCGGTCAAGAAGTTAATGTACGAGTTTTGCGTATCACAAGAGGACAAGTAACATTGACTATGAAGAAGGAGGAAGATACTGCAGGATTGGACTCAACATTTAACCATGGGGTTGTCCATGTTGCAACAAACCCTTTTGTGTTGGCTTTTCGTAAGAATAAGGATATTGCTTCTTTTTTGGATGAGAGGGAGAAAACTCAGAATGAGGTTCAAAAACCAACGACTGCAAGTACTTCGGAAGAAATTAAGGGAACTGTCAATCAAGGGGAAACTGTATTGGATGTTCCTGACGTTCAGGGTGAACCAGAAAGCAGCAAGTTGACAGATGATGATGTTCCTTCTGCTGAAGATGATATTTCTGAAAATGTGGGAACCAGTGCAACAAATGGCTCCTCAACAGCTATTGTGGATGATGAAAGTAACCTAGTCAGCAATGTTTCTAGCCCAACGACAGGTATAGATAGTGCCATTGAGAAGGAAGAAGAGGTTGCTTCTGGAAGTTTGATTCCTGAAGAGGATCTATCTACTGTAAATCCAATAATTGAAGAAGTTACTCAGACAGATGTCACAAACGATTTGAAAACTGACACACCTGTTGAAATAGCTAATGAAAATGTAATAGAAACTGGAGTTGATCAAATTGTTACGGAAGATGAGAAACAATCACAAACTCCTGATGCAATTGAAGAGTTTGCAGCTGCAGTACTAACAGACAGTGATGTGGTTGAACCTAGCCCTGATAAAAATGATACAATAACAGAATCAGATATTACATCGAGTGCACCAGCTCTCCAAGAAAGTGCAGATGATGATGTTGGAGCTATTACTGAAAACATTGACAGCGATACTAGTTTGGGTGGACAAAGTGACGAGTTGTCTCCTGTGGGAAGCTTGACTACAGATGCAACAGAAGAAACTGATCAGGTTCCTTCTCCTGAAAGTTCTGCCACTGAAGTAGTAAAACCCTCCGTTGATGATCCTGAAGAAGAAGCACAAAAACTAACTCCTGCCACAGAGAATGAAAATTCTTTTACCTCACAAGTTGAAGACAAAGAGGTTGCAATTGCATGTGAGGAAAATAACAGTTTATCTAATTCTGATGGACAAACTGGCGCTACTTCAGGAGAAGGCTTGAGTAAAGCAACTATATCACCAGCACTTGTGAAGCAACTTCGGGAAGAAACAGGAGCTGGAATGATGGATTGCAAAAAAGCACTATCAGAGACCGGTGGGGACATTATTAAAGCACAAGAGTACCTTAGAAAAAAAGGCTTATCAAGTGCAGACAAGAAAGCAAGCAGGGTCACTGCTGAAGGAAGGATAGGTTCTTACATCCATGACAGCAGGATAGGTGTTTTGGTAGAAGTAAACTGTGAGACAGATTTTGTCTCACGAGGTGAAATTTTTAAAGAGCTTGTCGATGATATAGCCATGCAAGTGGCTGCATGCCCTCAAGTAGAGTATCTTGTTACTGAAGATGTTCCCGAGGAAATTGTGAACAAAGAAAAAGAAATAGAAATGCAGAAAGAAGATCTTTTGTCAAAACCAGAGCAGATAAGATCAAAGATTGTTGAAGGGCGGATAAGAAAAAGACTTGAGGAGCTGGCATTGCTCGAGCAGTCCTACATTAAGGATGATAAGGTAGCAGTAAAGGACTTCATCAAGCAAACTATTGCAACTATTGGAGAAAATATTAAAGTTAAGAGGTTTGTGCGGTTCAACCTTGGAGAGGGTTTAGAGAAGAAAAGCCAGGATTTTGCTGCTGAAGTAGCAGCACAAACTGCAGCAAAACCAGCACCTATGCCAGCGAAAGAGCAACCTGCTGTTCCAGAAGCCAAGGAGACCGAGCCAAAGCAATCAACAGTAGCAGTCTCAGCCTCATTGGTTAAGCAACTGAGGGAAGAAACTGGAGCAGGGATGATGGACTGTAAGAAAGCTCTAGCTGAAACTGGAGGGGACCTTGAAAAGGCTCAAGAGTACCTCAGAAAAAAGGGTCTCTCAACCGCTGACAAAAAATCCAGCAGGCTAGCAGCTGAAGGCAGAATTGGTTCATACATTCACGATTCACGCATCGGCGTTCTAATTGAAGTGAACTGTGAAACTGACTTTGTTGGTAGAGGTGAGAAATTCAAGGAGTTGGTCGATGATCTTGCAATGCAAGTTGTGGCCTGCCCACAGGTGCAGTTTGTATCCATTGAAGATATTCCAGAGACTATTGTGAACAAAGAAAAGGAACTTGAAATGCAGAGAGAGGACCTGCTTTCAAAACCAGAGAACATTAGAGAAAAAATTGTCGAGGGCAGGATCTTAAAGAGGCTCGGGGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTTTAGTGAAAGACTTGGTTAAGCAAACTGTAGCTGCACTTGGAGAGAACATTAAAGTGCGCCGTTTTGTTCGGTTTACGCTTGGGGAGACATCTGAAAAAGAAACAACAGTACCAGCATAA

>Glyma.01g145400.2 sequence-type=CDS polypeptide=Glyma.01g145400.2.p locus=Glyma.01g145400 id=Glyma.01g145400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATCCTGTAATACCATGCTCTATTGGCAATGTTTCAATTATTCCTGTATTCATCTATTCAACAAGGAAGAATAACACTTTAACAAGATTCAACTTGTCAAGGAGCACTGTAAAACCTGGATCATCATCTTGGAGATTTCTATTACCTTCATTTGTTGCCAGTGGAGCGTTTCCACAAAACAAAGGAATACGCTCTTTTCATAAGAAATCTAGCACCTCCATATCAGCCACAGAAACAGATGTAACAGTGGAGGAACCAAGTCCTGTTGCTGATGAAGATTCTGGTGAAATTACTTCAAATGAAGTTGGAATTAGTGAAGATTCATCTTCTAAGTCTGATGCCAACCCTGATCCAGCTAAAGGTAGACGTTCAAGACCTGCAAGGAAAAGTGAGATGCCTCCTGTAAAGAATGAGGATTTGATACCTGGGGCAACTTTTACTGGGAAAGTGAAATCTGTCCAGCCATTTGGTGCCTTCGTTGATATTGGTGCTTTCACAGATGGGCTTGTTCATATTTCGATGTTGAGTGATAGCTATGTTAAGGATGTTACAAGTGTTGTTTCTGTAGGTCAAGAAGTGAAGGTGAAGCTGATTGAAGTGAATACTGAAACTCAGCGTATTTCTCTCTCTATGCGTGAAAATGCTGACACTGGTAAGCAGCGTAAAGATGCACCTGTCAAGACAGAGAAAGCTGGACCTGGGAAGAGGAACAGTTCAAAACCCAGTTCAAAGAAAGATAATGTGACGAAAAGCACCAAATTTGCCATAGGGCAGCAACTGGTTGGTTCAGTGAAGAATTTGGCTAGGAGTGGTGCTTTTATATCTCTTCCTGAAGGGGAGGAAGGATTTCTACCTGTATCTGAGGAACCTGATGATGGATTTGATAATGTTATGGGGAACACTACGCTGGAAGTCGGTCAAGAAGTTAATGTACGAGTTTTGCGTATCACAAGAGGACAAGTAACATTGACTATGAAGAAGGAGGAAGATACTGCAGGATTGGACTCAACATTTAACCATGGGGTTGTCCATGTTGCAACAAACCCTTTTGTGTTGGCTTTTCGTAAGAATAAGGATATTGCTTCTTTTTTGGATGAGAGGGAGAAAACTCAGAATGAGGTTCAAAAACCAACGACTGCAAGTACTTCGGAAGAAATTAAGGGAACTGTCAATCAAGGGGAAACTGTATTGGATGTTCCTGACGTTCAGGGTGAACCAGAAAGCAGCAAGTTGACAGATGATGATGTTCCTTCTGCTGAAGATGATATTTCTGAAAATGTGGGAACCAGTGCAACAAATGGCTCCTCAACAGCTATTGTGGATGATGAAAGTAACCTAGTCAGCAATGTTTCTAGCCCAACGACAGGTATAGATAGTGCCATTGAGAAGGAAGAAGAGGTTGCTTCTGGAAGTTTGATTCCTGAAGAGGATCTATCTACTGTAAATCCAATAATTGAAGAAGTTACTCAGACAGATGTCACAAACGATTTGAAAACTGACACACCTGTTGAAATAGCTAATGAAAATGTAATAGAAACTGGAGTTGATCAAATTGTTACGGAAGATGAGAAACAATCACAAACTCCTGATGCAATTGAAGAGTTTGCAGCTGCAGTACTAACAGACAGTGATGTGGTTGAACCTAGCCCTGATAAAAATGATACAATAACAGAATCAGATATTACATCGAGTGCACCAGCTCTCCAAGAAAGTGCAGATGATGATGTTGGAGCTATTACTGAAAACATTGACAGCGATACTAGTTTGGGTGGACAAAGTGACGAGTTGTCTCCTGTGGGAAGCTTGACTACAGCAACTATATCACCAGCACTTGTGAAGCAACTTCGGGAAGAAACAGGAGCTGGAATGATGGATTGCAAAAAAGCACTATCAGAGACCGGTGGGGACATTATTAAAGCACAAGAGTACCTTAGAAAAAAAGGCTTATCAAGTGCAGACAAGAAAGCAAGCAGGGTCACTGCTGAAGGAAGGATAGGTTCTTACATCCATGACAGCAGGATAGGTGTTTTGGTAGAAGTAAACTGTGAGACAGATTTTGTCTCACGAGGTGAAATTTTTAAAGAGCTTGTCGATGATATAGCCATGCAAGTGGCTGCATGCCCTCAAGTAGAGTATCTTGTTACTGAAGATGTTCCCGAGGAAATTGTGAACAAAGAAAAAGAAATAGAAATGCAGAAAGAAGATCTTTTGTCAAAACCAGAGCAGATAAGATCAAAGATTGTTGAAGGGCGGATAAGAAAAAGACTTGAGGAGCTGGCATTGCTCGAGCAGTCCTACATTAAGGATGATAAGGTAGCAGTAAAGGACTTCATCAAGCAAACTATTGCAACTATTGGAGAAAATATTAAAGTTAAGAGGTTTGTGCGGTTCAACCTTGGAGAGGGTTTAGAGAAGAAAAGCCAGGATTTTGCTGCTGAAGTAGCAGCACAAACTGCAGCAAAACCAGCACCTATGCCAGCGAAAGAGCAACCTGCTGTTCCAGAAGCCAAGGAGACCGAGCCAAAGCAATCAACAGTAGCAGTCTCAGCCTCATTGGTTAAGCAACTGAGGGAAGAAACTGGAGCAGGGATGATGGACTGTAAGAAAGCTCTAGCTGAAACTGGAGGGGACCTTGAAAAGGCTCAAGAGTACCTCAGAAAAAAGGGTCTCTCAACCGCTGACAAAAAATCCAGCAGGCTAGCAGCTGAAGGCAGAATTGGTTCATACATTCACGATTCACGCATCGGCGTTCTAATTGAAGTGAACTGTGAAACTGACTTTGTTGGTAGAGGTGAGAAATTCAAGGAGTTGGTCGATGATCTTGCAATGCAAGTTGTGGCCTGCCCACAGGTGCAGTTTGTATCCATTGAAGATATTCCAGAGACTATTGTGAACAAAGAAAAGGAACTTGAAATGCAGAGAGAGGACCTGCTTTCAAAACCAGAGAACATTAGAGAAAAAATTGTCGAGGGCAGGATCTTAAAGAGGCTCGGGGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTTTAGTGAAAGACTTGGTTAAGCAAACTGTAGCTGCACTTGGAGAGAACATTAAAGTGCGCCGTTTTGTTCGGTTTACGCTTGGGGAGACATCTGAAAAAGAAACAACAGTACCAGCATAA
Predicted protein sequences of Glyma.01g145400
>Glyma.01g145400.1.p sequence-type=predicted peptide transcript=Glyma.01g145400.1 locus=Glyma.01g145400 id=Glyma.01g145400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNPVIPCSIGNVSIIPVFIYSTRKNNTLTRFNLSRSTVKPGSSSWRFLLPSFVASGAFPQNKGIRSFHKKSSTSISATETDVTVEEPSPVADEDSGEITSNEVGISEDSSSKSDANPDPAKGRRSRPARKSEMPPVKNEDLIPGATFTGKVKSVQPFGAFVDIGAFTDGLVHISMLSDSYVKDVTSVVSVGQEVKVKLIEVNTETQRISLSMRENADTGKQRKDAPVKTEKAGPGKRNSSKPSSKKDNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEPDDGFDNVMGNTTLEVGQEVNVRVLRITRGQVTLTMKKEEDTAGLDSTFNHGVVHVATNPFVLAFRKNKDIASFLDEREKTQNEVQKPTTASTSEEIKGTVNQGETVLDVPDVQGEPESSKLTDDDVPSAEDDISENVGTSATNGSSTAIVDDESNLVSNVSSPTTGIDSAIEKEEEVASGSLIPEEDLSTVNPIIEEVTQTDVTNDLKTDTPVEIANENVIETGVDQIVTEDEKQSQTPDAIEEFAAAVLTDSDVVEPSPDKNDTITESDITSSAPALQESADDDVGAITENIDSDTSLGGQSDELSPVGSLTTDATEETDQVPSPESSATEVVKPSVDDPEEEAQKLTPATENENSFTSQVEDKEVAIACEENNSLSNSDGQTGATSGEGLSKATISPALVKQLREETGAGMMDCKKALSETGGDIIKAQEYLRKKGLSSADKKASRVTAEGRIGSYIHDSRIGVLVEVNCETDFVSRGEIFKELVDDIAMQVAACPQVEYLVTEDVPEEIVNKEKEIEMQKEDLLSKPEQIRSKIVEGRIRKRLEELALLEQSYIKDDKVAVKDFIKQTIATIGENIKVKRFVRFNLGEGLEKKSQDFAAEVAAQTAAKPAPMPAKEQPAVPEAKETEPKQSTVAVSASLVKQLREETGAGMMDCKKALAETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRGEKFKELVDDLAMQVVACPQVQFVSIEDIPETIVNKEKELEMQREDLLSKPENIREKIVEGRILKRLGELALLEQPFIKDDSVLVKDLVKQTVAALGENIKVRRFVRFTLGETSEKETTVPA*

>Glyma.01g145400.2.p sequence-type=predicted peptide transcript=Glyma.01g145400.2 locus=Glyma.01g145400 id=Glyma.01g145400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNPVIPCSIGNVSIIPVFIYSTRKNNTLTRFNLSRSTVKPGSSSWRFLLPSFVASGAFPQNKGIRSFHKKSSTSISATETDVTVEEPSPVADEDSGEITSNEVGISEDSSSKSDANPDPAKGRRSRPARKSEMPPVKNEDLIPGATFTGKVKSVQPFGAFVDIGAFTDGLVHISMLSDSYVKDVTSVVSVGQEVKVKLIEVNTETQRISLSMRENADTGKQRKDAPVKTEKAGPGKRNSSKPSSKKDNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEPDDGFDNVMGNTTLEVGQEVNVRVLRITRGQVTLTMKKEEDTAGLDSTFNHGVVHVATNPFVLAFRKNKDIASFLDEREKTQNEVQKPTTASTSEEIKGTVNQGETVLDVPDVQGEPESSKLTDDDVPSAEDDISENVGTSATNGSSTAIVDDESNLVSNVSSPTTGIDSAIEKEEEVASGSLIPEEDLSTVNPIIEEVTQTDVTNDLKTDTPVEIANENVIETGVDQIVTEDEKQSQTPDAIEEFAAAVLTDSDVVEPSPDKNDTITESDITSSAPALQESADDDVGAITENIDSDTSLGGQSDELSPVGSLTTATISPALVKQLREETGAGMMDCKKALSETGGDIIKAQEYLRKKGLSSADKKASRVTAEGRIGSYIHDSRIGVLVEVNCETDFVSRGEIFKELVDDIAMQVAACPQVEYLVTEDVPEEIVNKEKEIEMQKEDLLSKPEQIRSKIVEGRIRKRLEELALLEQSYIKDDKVAVKDFIKQTIATIGENIKVKRFVRFNLGEGLEKKSQDFAAEVAAQTAAKPAPMPAKEQPAVPEAKETEPKQSTVAVSASLVKQLREETGAGMMDCKKALAETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGRGEKFKELVDDLAMQVVACPQVQFVSIEDIPETIVNKEKELEMQREDLLSKPENIREKIVEGRILKRLGELALLEQPFIKDDSVLVKDLVKQTVAALGENIKVRRFVRFTLGETSEKETTVPA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo