SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g143800

Feature Type:gene_model
Chromosome:Gm01
Start:48859428
stop:48864570
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g143800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G00210.1AT LBD31 JGI N/AIEA
PTHR31529PantherFam LOB DOMAIN CONTAINING PROTEIN JGI N/AIEA
PF03195Pfam Lateral organ boundaries (LOB) domain JGI N/AIEA

Gene model name correspondences to Glyma.01g143800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g34523 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g143800
>Glyma.01g143800.3 sequence-type=CDS polypeptide=Glyma.01g143800.3.p locus=Glyma.01g143800 id=Glyma.01g143800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATTGTGGGGGTAACAAGATTGGTGGAAGTGATAGGGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGAAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACGGCTCATTTTGCTGCGGTGCACAAGGTGTTTGGTGCTAGCAATGCCTCTAAGTTACTCATGCGGATTCCAGCACACAAAAGACTTGATGCTGTTGTTACTCTTTGCTATGAGGCTTTGGCTAGGGCTAGAGACCCCGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTCATGAACTTGCAGGCTGAGTTAACCTATGTCCAGGCTCGTCTCGCGACGATGCAGCGACTGCCAATGCAAGTGGCTCCTCTTCCACACCCTCAAAGCTCTTCACCACCACCAACCTTTCATTCCTCAGATCACTTGGCATCAAATGCTGACTTGCAAAGTGCCCCTATGATGCACTTTGATCCTCTTCAGCCACATTCAGCATCATTAGAGTTAAGCAGCGTCGTTTTCAATCAATCAGATCAACAACTCGAGGATAGGGAACTCCAAGTTTTGGCACGGGAATTTGTGAGCAAATACTTGCCCGGAGTAAGGTTCCAGCAATACAACTCTCCCTGA
Predicted protein sequences of Glyma.01g143800
>Glyma.01g143800.3.p sequence-type=predicted peptide transcript=Glyma.01g143800.3 locus=Glyma.01g143800 id=Glyma.01g143800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDCGGNKIGGSDRGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRLPMQVAPLPHPQSSSPPPTFHSSDHLASNADLQSAPMMHFDPLQPHSASLELSSVVFNQSDQQLEDRELQVLAREFVSKYLPGVRFQQYNSP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo