SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g138000

Feature Type:gene_model
Chromosome:Gm01
Start:47623645
stop:47626104
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g138000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G45220.1AT JGI N/AIEA
3.1.1.11EC pectinesterase JGI N/AIEA
GO:0042545GO-bp cell wall modification JGI N/AIEA
GO:0005618GO-cc cell wall JGI N/AIEA
GO:0004857GO-mf enzyme inhibitor activity JGI N/AIEA
GO:0030599GO-mf pectinesterase activity JGI N/AIEA
K01051KEGG Two-component system JGI N/AIEA
PTHR31707PantherFam PECTINESTERASE JGI N/AIEA
PTHR31707:SF11PantherFam PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED JGI N/AIEA
PF01095Pfam Pectinesterase JGI N/AIEA
PF04043Pfam Plant invertase/pectin methylesterase inhibitor JGI N/AIEA

Gene model name correspondences to Glyma.01g138000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g33480 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g138000
>Glyma.01g138000.1 sequence-type=CDS polypeptide=Glyma.01g138000.1.p locus=Glyma.01g138000 id=Glyma.01g138000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAAGCTTTTCGCCTGCTCCTAGCACTACTAATTCCTTTTTTACTATCCTCTTTTGTTTCTGGTTATTCTTGGAATGAGGTTAAACTTTGGTGCAACCAAACCCCAAACCCTCAACCATGTGAGTATTTCTTGAGCAATAATCCTACTTATCAATACAAACCCCTCAAGCAAAAATCTGATTTCCTCAAACTTTCATTGCAACTTGCTCAAGAGAGAGCACTCAAAGGCCATGAAAACACTCTCTCACTTGGCTCTAAGTGCCGAAACCCACGTGAAAGAGTTGCTTGGGCTGATTGTGTTGAGCTTTATGAGCAAACTATTCGCAAACTCAACCAAACCCTAAAGCCTAACACCAAGCTCTCCCAAGTTGATGCCCAAACATGGCTCAGCACAGCTCTCACTAACCTTGAGACATGCAAAGCCGGGTTCTATGAGCTTGGTGTTCAAGACTACGTTCTCCCTTTGATGTCCAACAATGTTACTAAGTTGCTGAGCAACACCTTGGCCCTTAACAAGGTTCCATACCAAGAACCAAGTTACAAAGAAGGGTTTCCAACATGGGTGAAGCCAGGTGATAGAAAGTTGTTGCAAGCTTCTTCACCGGCTTCTCGAGCCAACGTAGTGGTGGCAAAAGATGGCTCTGGAAGGTTCACAACAGTGAGTGCAGCTATAAATGCAGCTCCAAAGAGTAGTAGTGGAAGGTATGTGATATATGTGAAGGGTGGGGTGTACGATGAACAAGTTGAGGTGAAAGCAAAGAATATAATGTTGGTTGGAGATGGTATTGGAAAGACTATAATCACAGGTAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCAGCCACTGTTGCTGTAGTTGGGGATGGATTTATAGCTCAAGGTATCACATTTAGGAACACCGCTGGTGCAAAAAACCACCAAGCTGTAGCATTGCGTTCTGGATCGGACTTGTCAGTGTTTTACAAATGTAGCTTTGAAGGTTACCAAGACACATTATATGTCCACTCTGAGAGGCAATTCTATAGAGAGTGTAACATTTATGGCACTGTTGACTTCATATTTGGCAATGCTGCAGTTGTGTTACAAAACTGTAACATATTTGCAAGAAACCCTCCCAACAAAGTCAACACAATCACTGCCCAAGGCCGAACCGACCCAAATCAAAACACTGGAATTTCCATTCACAATTCAAGAGTCACAGCTGCATCAGATTTGAGACCAGTTCAAAACTCGGTTAGGACTTATCTTGGAAGACCATGGAAGCAATATTCAAGAACAGTTTTCATGAAGACTTATCTTGATGGCTTGATCAACCCTGCGGGTTGGATGGAATGGAGTGGTAACTTTGCATTAGACACGCTTTATTATGGAGAGTACATGAACACTGGTCCAGGTTCTTCTACTGCTAGACGTGTTAAATGGTCTGGTTATCGTGTCATAACTAGCGCTTCTGAAGCCTCAAAGTTCAGTGTTGCAAATTTTATTGCTGGAAACGCATGGCTACCTTCCACCAAAGTGCCTTTTACCCCTTCTCTTTAA
Predicted protein sequences of Glyma.01g138000
>Glyma.01g138000.1.p sequence-type=predicted peptide transcript=Glyma.01g138000.1 locus=Glyma.01g138000 id=Glyma.01g138000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKAFRLLLALLIPFLLSSFVSGYSWNEVKLWCNQTPNPQPCEYFLSNNPTYQYKPLKQKSDFLKLSLQLAQERALKGHENTLSLGSKCRNPRERVAWADCVELYEQTIRKLNQTLKPNTKLSQVDAQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVPYQEPSYKEGFPTWVKPGDRKLLQASSPASRANVVVAKDGSGRFTTVSAAINAAPKSSSGRYVIYVKGGVYDEQVEVKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGAKNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVLQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAASDLRPVQNSVRTYLGRPWKQYSRTVFMKTYLDGLINPAGWMEWSGNFALDTLYYGEYMNTGPGSSTARRVKWSGYRVITSASEASKFSVANFIAGNAWLPSTKVPFTPSL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo