SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g125500

Feature Type:gene_model
Chromosome:Gm01
Start:44502158
stop:44506078
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g125500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G09360.1AT JGI N/AIEA
GO:0006352GO-bp DNA-templated transcription, initiation JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0006384GO-bp transcription initiation from RNA polymerase III promoter JGI N/AIEA
GO:0000126GO-cc transcription factor TFIIIB complex JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
PTHR11618PantherFam TRANSCRIPTION INITIATION FACTOR IIB-RELATED JGI N/AIEA
PTHR11618:SF4PantherFam TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT JGI N/AIEA

Gene model name correspondences to Glyma.01g125500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.01g125500
>Glyma.01g125500.1 sequence-type=CDS polypeptide=Glyma.01g125500.1.p locus=Glyma.01g125500 id=Glyma.01g125500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTACTACAGTCACCGTGCCAAAAATGTCGCCGGCCAGCGACTAGATGATGGTTTCTTATGTTGTGGAAGTTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAGCCTTCATTTGTTAAGAATGCGGTAGGGCAGAGTAAATTATCAGGCAATTATGTAAGAATAGTTCAAAGTGAGTACTCTGAATCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATTAAATATTTAAGTTTTGGCCTTGGAGTTAATGATGAACATATGGCTGAACAAGCTTTGACCTTTTATAAAGTAAAGACCAGTTTTGACTTACTCATTTTAAACTTGCTTTCTATTTATTTGCACATTTTTTGA

>Glyma.01g125500.2 sequence-type=CDS polypeptide=Glyma.01g125500.2.p locus=Glyma.01g125500 id=Glyma.01g125500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTACTACAGTCACCGTGCCAAAAATGTCGCCGGCCAGCGACTAGATGATGGTTTCTTATGTTGTGGAAGTTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAGCCTTCATTTGTTAAGAATGCGGTAGGGCAGAGTAAATTATCAGGCAATTATGTAAGAATAGTTCAAAGTGAGTACTCTGAATCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATTAAATATTTAAGTTTTGGCCTTGGAGTTAATGATGAACATATGGCTGAACAAGCTTTGACCTTTTATAAAGTAAAGACCAGTTTTGACTTACTCATTTTAAACTTGCTTTCTATTTATTTGCACATTTTTTGA
Predicted protein sequences of Glyma.01g125500
>Glyma.01g125500.1.p sequence-type=predicted peptide transcript=Glyma.01g125500.1 locus=Glyma.01g125500 id=Glyma.01g125500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVYYSHRAKNVAGQRLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAVGQSKLSGNYVRIVQSEYSESRQRTLDRAYDEIKYLSFGLGVNDEHMAEQALTFYKVKTSFDLLILNLLSIYLHIF*

>Glyma.01g125500.2.p sequence-type=predicted peptide transcript=Glyma.01g125500.2 locus=Glyma.01g125500 id=Glyma.01g125500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVYYSHRAKNVAGQRLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAVGQSKLSGNYVRIVQSEYSESRQRTLDRAYDEIKYLSFGLGVNDEHMAEQALTFYKVKTSFDLLILNLLSIYLHIF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo