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Report for Sequence Feature Glyma.01g116000

Feature Type:gene_model
Chromosome:Gm01
Start:40641812
stop:40644927
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g116000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G51880.2AT HMGB1,NFD1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003682GO-mf chromatin binding JGI N/AIEA
K10802KEGG Exosome JGI N/AIEA
KOG0381 KOG HMG box-containing protein JGI N/AIEA
PF00505Pfam HMG (high mobility group) box JGI N/AIEA

Gene model name correspondences to Glyma.01g116000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g28820 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g116000
>Glyma.01g116000.1 sequence-type=CDS polypeptide=Glyma.01g116000.1.p locus=Glyma.01g116000 id=Glyma.01g116000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGACTGCAAAGGGCAAGGGAGCAGCGAGGCCCTCAAAAGAATCACTGAAGCCTGTTGATGACCGAAAGGTTGGAAAGCGGAAGGCTTCTGGTAAGCCTGAGAAAAGCAGAGCACCAAAGAAGGAGAAGAAGGCCAAGAAAGACCCCAACAAGCCTAAAAGACCACCGAGTGCTTTCTTCGTGTTCCTTGAGGAGTTCAGGAAGACCTTTAAGGCTGAGAATCCTCTCGTGAAGGCTGTATCAGTTGTTGGAAAAGCTGGAGGAGAGAAATGGAAATCCCTGTCCAGTGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAAGGAAAGCTGAGTATGAAAAACTTATCAAAGCTTATGAGAAAAAGCAGGCAAGCTCTGCAGATGATGATGAATCAGACAAGTCCAAATCTGAAGTGAATGATGAAGATGATGCCAGTGGAGAGGAGGACCACCAAGAGGACGAGGATGATGAGGAGGAAGAGGACGATGAAGATGATGACTGA

>Glyma.01g116000.6 sequence-type=CDS polypeptide=Glyma.01g116000.6.p locus=Glyma.01g116000 id=Glyma.01g116000.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGACTGCAAAGGGCAAGGGAGCAGCGAGGCCCTCAAAAGAATCACTGAAGCCTGTTGATGACCGAAAGGTTGGAAAGCGGAAGGCTTCTGGTAAGCCTGAGAAAAGCAGAGCACCAAAGAAGGAGAAGAAGGCCAAGAAAGACCCCAACAAGCCTAAAAGACCACCGAGTGCTTTCTTCGTGTTCCTTGAGGAGTTCAGGAAGACCTTTAAGGCTGAGAATCCTCTCGTGAAGGCTGTATCAGTTGTTGGAAAAGCTGGAGGAGAGAAATGGAAATCCCTGTCCAGTGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAAGGAAAGCTGAGTATGAAAAACTTATCAAAGCTTATGAGAAAAAGCAGGCAAGCTCTGCAGATGATGATGAATCAGACAAGTCCAAATCTGAAGTGAATGATGAAGATGATGCCAGTGGAGAGGAGGACCACCAAGAGGACGAGGATGATGAGGAGGAAGAGGACGATGAAGATGATGACTGA
Predicted protein sequences of Glyma.01g116000
>Glyma.01g116000.1.p sequence-type=predicted peptide transcript=Glyma.01g116000.1 locus=Glyma.01g116000 id=Glyma.01g116000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKTAKGKGAARPSKESLKPVDDRKVGKRKASGKPEKSRAPKKEKKAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAAKRKAEYEKLIKAYEKKQASSADDDESDKSKSEVNDEDDASGEEDHQEDEDDEEEEDDEDDD*

>Glyma.01g116000.6.p sequence-type=predicted peptide transcript=Glyma.01g116000.6 locus=Glyma.01g116000 id=Glyma.01g116000.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKTAKGKGAARPSKESLKPVDDRKVGKRKASGKPEKSRAPKKEKKAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAAKRKAEYEKLIKAYEKKQASSADDDESDKSKSEVNDEDDASGEEDHQEDEDDEEEEDDEDDD*






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