Glyma.01g102500

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Report for Sequence Feature Glyma.01g102500

Feature Type:	gene_model
Chromosome:	Gm01
Start:	34132184
stop:	34133925
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.01g102500

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G37770.2	AT	NAD(P)-linked oxidoreductase superfamily protein	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
KOG1577	KOG	Aldo/keto reductase family proteins	JGI	N/A	IEA
PTHR11732	Panther	ALDO/KETO REDUCTASE	JGI	N/A	IEA
PTHR11732:SF34	Panther	ALDO-KETO REDUCTASE	JGI	N/A	IEA
PF00248	PFAM	Aldo/keto reductase family	JGI	N/A	IEA
PWY-5453	SoyCyc9	methylglyoxal degradation III	Plant Metabolic Network		ISS
PWY-6786	SoyCyc9	detoxification of reactive carbonyls in chloroplasts	Plant Metabolic Network		ISS
GN7V-47279	SoyCyc9-rxn	aldehyde reductase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.01g102500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g102500 not represented in the dataset	Glyma.01g102500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.01g102500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma01g24915	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.01g102500

Limit To All Plant Sequences

>Glyma.01g102500.2 sequence-type=transcript locus=Glyma.01g102500 ID=Glyma.01g102500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGCTCTCAAGAAGTTTTTTGACAATGGTGTTGTAAAACGTAGACTTGTGGATCACCACCAAACTCTGTTTTTATTGTCTTCTCAACTCTTCTGAAAACTGTGTTGTTTCTTTGTGTTGAAAAAATATGTTTGTATTTGGTTCCTGAACAGAGATCCTCTGCTTTCTTGACTACATCCAGGTGCACAGATCATGCTCCAGAAGCATTAGATAGAGCTTTGAAAGAATTGCAACTTGACTACCTAGATCTCTATCTTATACATTTTCCAGTCCGCATGAAAAAGGGATCAGTTGGATTAAAGCCTGAAAAAGTTATACAACATGACATACCAAGTACATGGAGAGCAATGGAGGCACTCTTCTACTCTGGCAAGGTTAGAGCCATAGGAGTGAGCAATTTCTCTTCAAAGAAGCTTCAAGATCTGTTGGATATGGCAAGAGTTCCTCCAGCTGTTATACAAGTGGAATGCCACCCACAATGGCAGCAGCCAAAGATGCATGCATTTTGCGAGTCTAAAGGGATTCACCTAACTGGATACTCTCCTCTGGGATCAGGAGATGCTAGTGGTGACATCCTTAAATATCCAGTTCTCAAGGAAGTTGCAGAGAAATTAGGGAAGACACCAGCACAAGTTGCCCTTAGATGGGGCCTGCACGTAGGTCATAGTGTTCTGCCTATGAGTAGTAATGAGGTTAGGATCAAGGAAAATCTGGATGTGTTTGACCGGCCCATTCCTGAAGATTTGATGGCCAAATTCTCTGAAATTAAGCAGGAAAAGATAATTGGGGGTGATATTTTTGAATATGGGACCTGTGGTGTCTATAAGACAATTGAAATCTGAGCAGCATGCATCATCGAAATGTTGACACCAATTCTGCTGTTATCTATTACCATGTTAATTATTGGAGCCACCAGTTGTAGTGGTTCGATTATTCTGATCTGAGATACAGTGAAGTG

Coding sequences of Glyma.01g102500

Limit To All Plant Sequences

>Glyma.01g102500.1 sequence-type=CDS polypeptide=Glyma.01g102500.1.p locus=Glyma.01g102500 ID=Glyma.01g102500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGATCCTCTGCTTTCTTGACTACATCCAGGTGCACAGATCATGCTCCAGAAGCATTAGATAGAGCTTTGAAAGAATTGCAACTTGACTACCTAGATCTCTATCTTATACATTTTCCAGTCCGCATGAAAAAGGGATCAGTTGGATTAAAGCCTGAAAAAGTTATACAACATGACATACCAAGTACATGGAGAGCAATGGAGGCACTCTTCTACTCTGGCAAGGTTAGAGCCATAGGAGTGAGCAATTTCTCTTCAAAGAAGCTTCAAGATCTGTTGGATATGGCAAGAGTTCCTCCAGCTGTTATACAAGTGGAATGCCACCCACAATGGCAGCAGCCAAAGATGCATGCATTTTGCGAGTCTAAAGGGATTCACCTAACTGGATACTCTCCTCTGGGATCAGGAGATGCTAGTGGTGACATCCTTAAATATCCAGTTCTCAAGGAAGTTGCAGAGAAATTAGGGAAGACACCAGCACAAGTTGCCCTTAGATGGGGCCTGCACGTAGGTCATAGTGTTCTGCCTATGAGTAGTAATGAGGTTAGGATCAAGGAAAATCTGGATGTGTTTGACCGGCCCATTCCTGAAGATTTGATGGCCAAATTCTCTGAAATTAAGCAGGAAAAGATAATTGGGGGTGATATTTTTGAATATGGGACCTGTGGTGTCTATAAGACAATTGAAATCTGA

>Glyma.01g102500.2 sequence-type=CDS polypeptide=Glyma.01g102500.2.p locus=Glyma.01g102500 ID=Glyma.01g102500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAAAAGGGATCAGTTGGATTAAAGCCTGAAAAAGTTATACAACATGACATACCAAGTACATGGAGAGCAATGGAGGCACTCTTCTACTCTGGCAAGGTTAGAGCCATAGGAGTGAGCAATTTCTCTTCAAAGAAGCTTCAAGATCTGTTGGATATGGCAAGAGTTCCTCCAGCTGTTATACAAGTGGAATGCCACCCACAATGGCAGCAGCCAAAGATGCATGCATTTTGCGAGTCTAAAGGGATTCACCTAACTGGATACTCTCCTCTGGGATCAGGAGATGCTAGTGGTGACATCCTTAAATATCCAGTTCTCAAGGAAGTTGCAGAGAAATTAGGGAAGACACCAGCACAAGTTGCCCTTAGATGGGGCCTGCACGTAGGTCATAGTGTTCTGCCTATGAGTAGTAATGAGGTTAGGATCAAGGAAAATCTGGATGTGTTTGACCGGCCCATTCCTGAAGATTTGATGGCCAAATTCTCTGAAATTAAGCAGGAAAAGATAATTGGGGGTGATATTTTTGAATATGGGACCTGTGGTGTCTATAAGACAATTGAAATCTGA

Predicted protein sequences of Glyma.01g102500

Limit To All Plant Sequences

>Glyma.01g102500.1.p sequence-type=predicted peptide transcript=Glyma.01g102500.1 locus=Glyma.01g102500 ID=Glyma.01g102500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRSSAFLTTSRCTDHAPEALDRALKELQLDYLDLYLIHFPVRMKKGSVGLKPEKVIQHDIPSTWRAMEALFYSGKVRAIGVSNFSSKKLQDLLDMARVPPAVIQVECHPQWQQPKMHAFCESKGIHLTGYSPLGSGDASGDILKYPVLKEVAEKLGKTPAQVALRWGLHVGHSVLPMSSNEVRIKENLDVFDRPIPEDLMAKFSEIKQEKIIGGDIFEYGTCGVYKTIEI*

>Glyma.01g102500.2.p sequence-type=predicted peptide transcript=Glyma.01g102500.2 locus=Glyma.01g102500 ID=Glyma.01g102500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKKGSVGLKPEKVIQHDIPSTWRAMEALFYSGKVRAIGVSNFSSKKLQDLLDMARVPPAVIQVECHPQWQQPKMHAFCESKGIHLTGYSPLGSGDASGDILKYPVLKEVAEKLGKTPAQVALRWGLHVGHSVLPMSSNEVRIKENLDVFDRPIPEDLMAKFSEIKQEKIIGGDIFEYGTCGVYKTIEI*

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