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Report for Sequence Feature Glyma.01g102100

Feature Type:gene_model
Chromosome:Gm01
Start:33984834
stop:33989932
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01g102100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G37730.1AT Protein of unknown function (DUF604) JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016757GO-mf transferase activity, transferring glycosyl groups JGI N/AIEA
KOG2246 KOG Galactosyltransferases JGI N/AIEA
PTHR10811Panther FRINGE-RELATED JGI N/AIEA
PTHR10811:SF5Panther BETA-1,3-GLUCOSYLTRANSFERASE JGI N/AIEA
PF04646PFAM Protein of unknown function, DUF604 JGI N/AIEA
GN7V-66370SoyCyc9-rxn glycoprotein-N-acetylgalactosamine 3-β-galactosyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.01g102100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.01g102100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g24850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g102100
>Glyma.01g102100.1 sequence-type=CDS polypeptide=Glyma.01g102100.1.p locus=Glyma.01g102100 ID=Glyma.01g102100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGCTAGCTTCTTCCTTTCTAAAAGTTCACCAATACTATCTCACTAAGGCATGGAAAACCCTTGCCTTTCCAACCATCAAACTCACCAACCTCCTTTCCCTCTTCCTCAAAACTAGCCTTGCCCTATGCACTTGCTTTATCATCTCCCTCTTCTTTTACCTCTCTCTCTCTCTCTACCATCATAATTACAACTACTCACCATTTCAACACCCTTACCATTTCATAATCTCACACGATCCATCCACCTTTGAAAACAACAATGAACCAACCAATATTTCCCACATTGTGTTTGGCATGGGTGGTTCTGCCAAGTCTTGGCAGGACCATCGACACTACACCGAAGTCTGGTGGCAGCCGAATGTCACTAGAGGCTTTATGTGGTTGGAACAGGAACCTCTAGTTCTAGCCAAAGAGACGTGGCCGGAGACTTTACCGCCATATAAAGTCTCTGGTGTCACATCATCATTCATGTACACGAATAAGGTAGGGTTGCAATTTGCAATCCACTTGGCACGAATTCTAAAGGAGACTTTCCAGTTAGGGCTAGAAAACGTGAGGTGGTTTGTGATGGGAGACAATGACACTGTATTTTTCACGGAGAACCTAGTCACTGTGCTTGCGAAATACGATCATAATGAAATGTACTATATTGAAGACAACTCAGAGAGCGTGGAACAAAACGTGGCACAAACCTATGGCATGGCTTTTGGTGGTGGTGGGTTTGCCATAAGCTACCCTTTGGCAGAAGTGCTAGTGAAGATTTTGGATGGATGCATTAATCGCTATGCTGTGTTGTTTGGCTCTGATCAAAAGGTTCACGCATGCATGAGTGAGATTGGTGTTCAACTCACCAAAGAGCCTGGTTTTCATCAGACTGACGGGCTTCTCGCGGCGAACCCAATAGCGCCACTTGTGTCACTACACCACCTCCATGCTTCAGAGCCATTGTTTCGAGACACAGGTCGGGTCGAGTCCTTAAAAAGGTTTGTATCCGCATATAAAATGGATCCAGGTCGAATCCTCCAGAAGAGCATATGCTATGACCCGAATCGGAATTGGACATTCTCAGTGTCTTGGGGCTACAATGTGGAGTTGTACCGTTCTTTAGAGACGTCCATTGAGTTGCAAACAACGTTTAAGACTTTTCAAACATGGCGTGGGTATGAGGACCCGTTCACATTCAATACCCGACCCGTTATCCCCGACCAGTGTAAGAGGCCCGTGGTGTTCTTCTTGGATCAGATCGAAGATGGGGGACTCGGGGAATGGACTGAATCCTCGTATAAGATATATGACAATGTTTTGCTCGAGAAGTCTAATTGTTCTCTGGAAGTTCAATATGTCAATGTCACTGCCTCATACTTTAGGCCTGAGCTGTGGAAAAAGGCACCACGTAGACAATGCTGCGACATAATCAAAGGCACAGATGAAGGGAGCAATGTGGTCGAAATCGTGATCAGAGGCTGTCATCAATTTGAGAGTGTCACTCCTCCTTAA
Predicted protein sequences of Glyma.01g102100
>Glyma.01g102100.1.p sequence-type=predicted peptide transcript=Glyma.01g102100.1 locus=Glyma.01g102100 ID=Glyma.01g102100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSLASSFLKVHQYYLTKAWKTLAFPTIKLTNLLSLFLKTSLALCTCFIISLFFYLSLSLYHHNYNYSPFQHPYHFIISHDPSTFENNNEPTNISHIVFGMGGSAKSWQDHRHYTEVWWQPNVTRGFMWLEQEPLVLAKETWPETLPPYKVSGVTSSFMYTNKVGLQFAIHLARILKETFQLGLENVRWFVMGDNDTVFFTENLVTVLAKYDHNEMYYIEDNSESVEQNVAQTYGMAFGGGGFAISYPLAEVLVKILDGCINRYAVLFGSDQKVHACMSEIGVQLTKEPGFHQTDGLLAANPIAPLVSLHHLHASEPLFRDTGRVESLKRFVSAYKMDPGRILQKSICYDPNRNWTFSVSWGYNVELYRSLETSIELQTTFKTFQTWRGYEDPFTFNTRPVIPDQCKRPVVFFLDQIEDGGLGEWTESSYKIYDNVLLEKSNCSLEVQYVNVTASYFRPELWKKAPRRQCCDIIKGTDEGSNVVEIVIRGCHQFESVTPP*






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