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Report for Sequence Feature Glyma.01g101600

Feature Type:gene_model
Chromosome:Gm01
Start:33858350
stop:33858783
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01g101600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATCG00890.1AT NADH-Ubiquinone/plastoquinone (complex I) protein JGI N/AIEA
GO:0042773GO-bp ATP synthesis coupled electron transport EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0009507GO-cc chloroplast EnsemblGenomesN/AIEA
GO:0009535GO-cc chloroplast thylakoid membrane EnsemblGenomesN/AIEA
GO:0009536GO-cc plastid EnsemblGenomesN/AIEA
GO:0009579GO-cc thylakoid EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0008137GO-mf NADH dehydrogenase (ubiquinone) activity EnsemblGenomesN/AIEA
GO:0008137GO-mf NADH dehydrogenase (ubiquinone) activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0048038GO-mf quinone binding EnsemblGenomesN/AIEA
PF00361PFAM NADH-Ubiquinone/plastoquinone (complex I), various chains JGI N/AIEA
PWY-3781SoyCyc9 aerobic respiration I (cytochrome c) Plant Metabolic Network ISS
PWY-4302SoyCyc9 aerobic respiration III (alternative oxidase pathway) Plant Metabolic Network ISS
PWY-5083SoyCyc9 NAD/NADH phosphorylation and dephosphorylation Plant Metabolic Network ISS
GN7V-66134SoyCyc9-rxn NADH:ubiquinone reductase (H+-translocating) Plant Metabolic Network ISS

Expression Patterns of Glyma.01g101600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g101600 not represented in the dataset
Glyma.01g101600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.01g101600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g24811 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g101600
>Glyma.01g101600.1 sequence-type=CDS polypeptide=Glyma.01g101600.1.p locus=Glyma.01g101600 ID=Glyma.01g101600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGTTATTCCAAGACGGTTTTCGAAAAACTATCTTAGAAGACTGTCAGAGATCGAGCTTCAAGAAATAGTGAACGGTCTTATCAATACACAAATGTATAACTCCCCAAGAATTTTAATTGCACTTTTATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTATTCTAAATCTTATCCCTCGTTTTGTCCTTCTTTGGAACCCTCCCTTCCACACCATTGTTGCTACTCCATTCACCGTTGGTGACTCTTCCGTAACTGAACACCATCGATTTGTCAGGAGCCTCAGATTTCAAATCTAA
Predicted protein sequences of Glyma.01g101600
>Glyma.01g101600.1.p sequence-type=predicted peptide transcript=Glyma.01g101600.1 locus=Glyma.01g101600 ID=Glyma.01g101600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVIPRRFSKNYLRRLSEIELQEIVNGLINTQMYNSPRILIALLFITVGIGFKLSPAPSHQWTPILNLIPRFVLLWNPPFHTIVATPFTVGDSSVTEHHRFVRSLRFQI*






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