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Report for Sequence Feature Glyma.01g099700

Feature Type:gene_model
Chromosome:Gm01
Start:33208869
stop:33217763
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01g099700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G53900.2AT uracil phosphoribosyltransferase JGI N/AIEA
GO:0006206GO-bp pyrimidine nucleobase metabolic process EnsemblGenomesN/AIEA
GO:0006222GO-bp UMP biosynthetic process EnsemblGenomesN/AIEA
GO:0006223GO-bp uracil salvage EnsemblGenomesN/AIEA
GO:0009116GO-bp nucleoside metabolic process EnsemblGenomesN/AIEA
GO:0009116GO-bp nucleoside metabolic process JGI N/AIEA
GO:0043097GO-bp pyrimidine nucleoside salvage EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0009507GO-cc chloroplast EnsemblGenomesN/AIEA
GO:0004845GO-mf uracil phosphoribosyltransferase activity EnsemblGenomesN/AIEA
GO:0004849GO-mf uridine kinase activity EnsemblGenomesN/AIEA
KOG1017 KOG Predicted uracil phosphoribosyltransferase JGI N/AIEA
PTHR10285Panther URIDINE KINASE JGI N/AIEA
PF00156PFAM Phosphoribosyl transferase domain JGI N/AIEA
PWY-7183SoyCyc9 pyrimidine nucleobases salvage I Plant Metabolic Network ISS
PWY-7196SoyCyc9 superpathway of pyrimidine ribonucleosides salvage Plant Metabolic Network ISS
PWY-7208SoyCyc9 superpathway of pyrimidine nucleobases salvage Plant Metabolic Network ISS
PWYQT-4445SoyCyc9 pyrimidine salvage pathway Plant Metabolic Network ISS
GN7V-47998SoyCyc9-rxn uracil phosphoribosyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.01g099700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g099700 not represented in the dataset
Glyma.01g099700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.01g099700
ParalogEvidenceComments
Glyma.03g069600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01g099700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g24520 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.01g099700
>Glyma.01g099700.2 sequence-type=transcript locus=Glyma.01g099700 ID=Glyma.01g099700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGATATATCTATGTGTATCCCAAAAACCGTTGATCTAAAAATTAGCATATCAGATCATCTTCCCCAGTCACACACAAACAGCTCAACCTCGGACCAAGATTTACATTAGATAGATACATCATTCATACATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCCCTTTCCCCTCCGATGCGGCACCAATTCCGTACACATGtcactctccctctcgcctctctctttcccctctctTCACATTCACAACACCAAAGGCAATGCTACCAATAATAAATTAGATCTTTTTAATTTCCCatttattttgtgcttcatttattagtttttttttttttatatatattaatGGGTTTGTTTGCGTTGCTTTGCTCCCATTTATTACGTTGGATTCGATTCTCACATATATTTATTTATATACCCTTTTTATAAGTTGTGTTGTCACTGTTGCTTTCTTCTCCGCTCAGATCGCTTATTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTGTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCAAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGAGATTGGTTGCCAACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCTGTGGAACTCATTGATCCCAGGGAGCCTGTGGCTGTAATTCCAATCCTGAGAGCAGGCCTTGCTCTAGCTGAACATGCATCATCGATCTTGCCTGCAATAAAAACATATCATTTAGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTCCAGAAGGATCGAAAGTTTTTGTGGTTGATCCTATGCTGGCGACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGAAAAATATATGAAATACCTCATCTCCTCTCCCTTGGGTGCCATATTTTTCAATTTTTGAGGCCCAAAATTTGTCTATTTCTTCGGATGGATACTGAAGCCTTGATCAGTGGCACCCTTTCGGGTTACAATTACATAGGTATTGGTCATTATTATTATGAATTACATAGGTGTTATAAGTTCAAACTCCTAACGTAAAACTGACTAGCATGTCAATTCAAATTGTTTTTCTTTATGGCTTAAATATATTTTTAGTTCCTTAAATTTGGGATGAGTCTTTTTTAGTTCTCAAATTAAAATTTGTTGTTTTTAGTCTTCGGGTTAACTTTTGGCAGTTTAAACGCACAATTTTTTATTATTGACTGCGGAAGGGACTAAAAAACATTTTTAAAAAATTGTTTAAGTTTTAATTTGGGGGACTAAAAGTTATATACTCCCAACGTTGAGTGATTACAAATATATTTAAATCTTTTTTATTTATCAAATAGAATTTGCAGCATGCAAAACGCGTTAGATCCGAAAGAGTGCTAAGCCAAACACTCGTAGATTAATTTGCTTGAAACATCTGGAGTCTGGCCATTTGTTCTTTTTGAAATCTTCGGGCAAGTTTTTCTACGTGATCCAAAAGCATTTGCCC

>Glyma.01g099700.3 sequence-type=transcript locus=Glyma.01g099700 ID=Glyma.01g099700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGATATATCTATGTGTATCCCAAAAACCGTTGATCTAAAAATTAGCATATCAGATCATCTTCCCCAGTCACACACAAACAGCTCAACCTCGGACCAAGATTTACATTAGATAGATACATCATTCATACATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCCCTTTCCCCTCCGATGCGGCACCAATTCCGTACACATGtcactctccctctcgcctctctctttcccctctctTCACATTCACAACACCAAAGGCAATGCTACCAATAATAAATTAGATCTTTTTAATTTCCCatttattttgtgcttcatttattagtttttttttttttatatatattaatGGGTTTGTTTGCGTTGCTTTGCTCCCATTTATTACGTTGGATTCGATTCTCACATATATTTATTTATATACCCTTTTTATAAGTTGTGTTGTCACTGTTGCTTTCTTCTCCGCTCAGATCGCTTATTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTGTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCAAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGAGATTGGTTGGTAATTCCAATCCTGAGAGCAGGCCTTGCTCTAGCTGAACATGCATCATCGATCTTGCCTGCAATAAAAACATATCATTTAGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTCCAGAAGGATCGAAAGTTTTTGTGGTTGATCCTATGCTGGCGACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGAAAAATATATGAAATACCTCATCTCCTCTCCCTTGGGTGCCATATTTTTCAATTTTTGAGGCCCAAAATTTGTCTATTTCTTCGGATGGATACTGAAGCCTTGATCAGTGGCACCCTTTCGGGTTACAATTACATAGGTATTGGTCATTATTATTATGAATTACATAGGTGTTATAAGTTCAAACTCCTAACGTAAAACTGACTAGCATGTCAATTCAAATTGTTTTTCTTTATGGCTTAAATATATTTTTAGTTCCTTAAATTTGGGATGAGTCTTTTTTAGTTCTCAAATTAAAATTTGTTGTTTTTAGTCTTCGGGTTAACTTTTGGCAGTTTAAACGCACAATTTTTTATTATTGACTGCGGAAGGGACTAAAAAACATTTTTAAAAAATTGTTTAAGTTTTAATTTGGGGGACTAAAAGTTATATACTCCCAACGTTGAGTGATTACAAATATATTTAAATCTTTTTTATTTATCAAATAGAATTTGCAGCATGCAAAACGCGTTAGATCCGAAAGAGTGCTAAGCCAAACACTCGTAGATTAATTTGCTTGAAACATCTGGAGTCTGGCCATTTGTTCTTTTTGAAATCTTCGGGCAAGTTTTTCTACGTGATCCAAAAGCATTTGCCC
Coding sequences of Glyma.01g099700
>Glyma.01g099700.1 sequence-type=CDS polypeptide=Glyma.01g099700.1.p locus=Glyma.01g099700 ID=Glyma.01g099700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCCCTTTCCCCTCCGATGCGGCACCAATTCCGTACACATGTCACTCTCCCTCTCGCCTCTCTCTTTCCCCTCTCTTCACATTCACAACACCAAAGATCGCTTATTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTGTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCAAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGAGATTGGTTGCCAACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCTGTGGAACTCATTGATCCCAGGGAGCCTGTGGCTGTAATTCCAATCCTGAGAGCAGGCCTTGCTCTAGCTGAACATGCATCATCGATCTTGCCTGCAATAAAAACATATCATTTAGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTCCAGAAGGATCGAAAGTTTTTGTGGTTGATCCTATGCTGGCGACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGA

>Glyma.01g099700.2 sequence-type=CDS polypeptide=Glyma.01g099700.2.p locus=Glyma.01g099700 ID=Glyma.01g099700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCAAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGAGATTGGTTGCCAACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCTGTGGAACTCATTGATCCCAGGGAGCCTGTGGCTGTAATTCCAATCCTGAGAGCAGGCCTTGCTCTAGCTGAACATGCATCATCGATCTTGCCTGCAATAAAAACATATCATTTAGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTCCAGAAGGATCGAAAGTTTTTGTGGTTGATCCTATGCTGGCGACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGA

>Glyma.01g099700.3 sequence-type=CDS polypeptide=Glyma.01g099700.3.p locus=Glyma.01g099700 ID=Glyma.01g099700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCAAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGAGATTGGTTGGTAATTCCAATCCTGAGAGCAGGCCTTGCTCTAGCTGAACATGCATCATCGATCTTGCCTGCAATAAAAACATATCATTTAGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTCCAGAAGGATCGAAAGTTTTTGTGGTTGATCCTATGCTGGCGACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGA
Predicted protein sequences of Glyma.01g099700
>Glyma.01g099700.1.p sequence-type=predicted peptide transcript=Glyma.01g099700.1 locus=Glyma.01g099700 ID=Glyma.01g099700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MACSRIHFNLNLPFPSDAAPIPYTCHSPSRLSLSPLFTFTTPKIAYSSAPRRTCGAVCCQMTMEEKPLSENQMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVELIDPREPVAVIPILRAGLALAEHASSILPAIKTYHLGISRDEETLQPTIYLNKLPEKFPEGSKVFVVDPMLATGGTIVAAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT*

>Glyma.01g099700.2.p sequence-type=predicted peptide transcript=Glyma.01g099700.2 locus=Glyma.01g099700 ID=Glyma.01g099700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTMEEKPLSENQMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVELIDPREPVAVIPILRAGLALAEHASSILPAIKTYHLGISRDEETLQPTIYLNKLPEKFPEGSKVFVVDPMLATGGTIVAAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT*

>Glyma.01g099700.3.p sequence-type=predicted peptide transcript=Glyma.01g099700.3 locus=Glyma.01g099700 ID=Glyma.01g099700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTMEEKPLSENQMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLVIPILRAGLALAEHASSILPAIKTYHLGISRDEETLQPTIYLNKLPEKFPEGSKVFVVDPMLATGGTIVAAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT*






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