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Report for Sequence Feature Glyma.01g072500

Feature Type:gene_model
Chromosome:Gm01
Start:13391976
stop:13393047
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01g072500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53000.1AT 2A phosphatase associated protein of 46 kD JGI N/AIEA
GO:0009966GO-bp regulation of signal transduction EnsemblGenomesN/AIEA
GO:0009966GO-bp regulation of signal transduction JGI N/AIEA
GO:0035303GO-bp regulation of dephosphorylation EnsemblGenomesN/AIEA
GO:0043666GO-bp regulation of phosphoprotein phosphatase activity EnsemblGenomesN/AIEA
GO:0050790GO-bp regulation of catalytic activity EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0019888GO-mf protein phosphatase regulator activity EnsemblGenomesN/AIEA
GO:0051721GO-mf protein phosphatase 2A binding EnsemblGenomesN/AIEA
PTHR10933Panther IMMUNOGLOBULIN-BINDING PROTEIN 1 JGI N/AIEA
PF04177PFAM TAP42-like family JGI N/AIEA

Expression Patterns of Glyma.01g072500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g072500 not represented in the dataset
Glyma.01g072500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.01g072500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g10302 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g072500
>Glyma.01g072500.1 sequence-type=CDS polypeptide=Glyma.01g072500.1.p locus=Glyma.01g072500 ID=Glyma.01g072500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACGACTTGCCATTGTCGGCGCTCTTTGAGCAAGCCCGCAAGATCCACACCACAACCACCGATTCTAGCACCGACCAGGAGGTTGTAAAGAAGGGGTGCGAGGCTCTGCATAGATGCGAGGACATGGTCAATAATCTAGGTTTGTTCTCTCCCAACGAGACCAAAGAAGATATCAACACCACCAATCTCAAGTACATCCTGGTTCCAATGGAGCTGTTCCCGAAAGAGGAGGTTTGTGTCTAA
Predicted protein sequences of Glyma.01g072500
>Glyma.01g072500.1.p sequence-type=predicted peptide transcript=Glyma.01g072500.1 locus=Glyma.01g072500 ID=Glyma.01g072500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDDLPLSALFEQARKIHTTTTDSSTDQEVVKKGCEALHRCEDMVNNLGLFSPNETKEDINTTNLKYILVPMELFPKEEVCV*






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