SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
|
A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G20830.1 | AT | transferases;folic acid binding | JGI | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | JGI | N/A | IEA |
| GO:0005542 | GO-mf | folic acid binding | EnsemblGenomes | N/A | IEA |
| GO:0005542 | GO-mf | folic acid binding | JGI | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | JGI | N/A | IEA |
| PTHR12234 | Panther | FORMIMINOTRANSFERASE-CYCLODEAMINASE | JGI | N/A | IEA |
| PF07837 | PFAM | Formiminotransferase domain, N-terminal subdomain | JGI | N/A | IEA |
| PWY-3841 | SoyCyc9 | folate transformations II | Plant Metabolic Network | ISS | |
| GN7V-66939 | SoyCyc9-rxn | 5-formyltetrahydrofolate cyclo-ligase | Plant Metabolic Network | ISS |
|
Glyma.01g070400 not represented in the dataset |
Glyma.01g070400 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma01g09900 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.01g070400.1 sequence-type=CDS polypeptide=Glyma.01g070400.1.p locus=Glyma.01g070400 ID=Glyma.01g070400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAATTTCAATTGCACTGCTAACAAGGAGCAAAAGAAAACCGTAGACCAATCTATCTTATTGTGCTGCAAGTTCTTTGTCTCTGAATCACGCAACAATGCCACTCTCAATGCAATAGAACGAGCTGCAAGGTCAAACCCAGAAACTGTGATTGTGAACATGTTTCATGATCGAGCTTATAACAGGGCAAGGTACGACCTTGTGTCGTATGTTTTGCATGACTGCACAGGAAATCCCATATACAGCCCCTTGCATCAAACTGTCATAGCCATGGCTGAGGCTACATTCAATGCCGTCAACCTTGAATTCCATGAAGGTGCTCACCCTCGCTTGGGCGCAGTGGACGACATTGTTTTCCATCCACTTGGTCATGCGTCGCTCGACGAGGCAGCGTGGCTCGCCAAAGCAGTGGCAGCAGACATTGGCAACCGATTCAGTGTGCCAGTGTTTCTGTACGCTGCAGCCCACCCAACAGGGAAGGAACTTGACGCCATAAGGCGAGAGCTTGGATATTACAGGCCAAATTCTAGGGGCAGCCAATGGGCCGGGTGGGCAATGCCCGAAACGCTTCCTCTAAGCCCAGATGAAGGGCCTAACGTCGTTTCAAGAGCTAAAGGCATCACAATGATTGGTGCACGCCCTTGGGTCACACTCTACAACGTTCCAATTTTGTGCACTGATGTGTCAGTAGCAAGAAGGATTGCAAGGAAGGTGAGTGCTCGTGGCGGTGGCCTCCCCACTGTGCAAACGATTGCGCTTGTCCATGAGGACTCAACTGAGATAGCCTGCATGCTTTTGGACTCCAAGCAGGTTGGAGCGGATAGGGTTCAAAATAGGGTTGAGATGCTGGCCGCACAAGAGGGACTGGACATAGAACAAGGTTATTTCACTGACATTTCTCCAGAAATGATCGTAGAGAAATACATGAAATTAATCAATAGTGCTAACAAATCGTGA
>Glyma.01g070400.1.p sequence-type=predicted peptide transcript=Glyma.01g070400.1 locus=Glyma.01g070400 ID=Glyma.01g070400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MNFNCTANKEQKKTVDQSILLCCKFFVSESRNNATLNAIERAARSNPETVIVNMFHDRAYNRARYDLVSYVLHDCTGNPIYSPLHQTVIAMAEATFNAVNLEFHEGAHPRLGAVDDIVFHPLGHASLDEAAWLAKAVAADIGNRFSVPVFLYAAAHPTGKELDAIRRELGYYRPNSRGSQWAGWAMPETLPLSPDEGPNVVSRAKGITMIGARPWVTLYNVPILCTDVSVARRIARKVSARGGGLPTVQTIALVHEDSTEIACMLLDSKQVGADRVQNRVEMLAAQEGLDIEQGYFTDISPEMIVEKYMKLINSANKS*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
|
|
|
