SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g067300

Feature Type:gene_model
Chromosome:Gm01
Start:10954357
stop:10957530
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g067300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35800.1AT NRPB1,RNA_POL_II_LS,RNA_POL_II_LSRNA_POL_II_LS,RPB1 JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
PTHR19376PantherFam DNA-DIRECTED RNA POLYMERASE JGI N/AIEA
PTHR19376:SF37PantherFam DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 JGI N/AIEA
PF04997Pfam RNA polymerase Rpb1, domain 1 JGI N/AIEA

Gene model name correspondences to Glyma.01g067300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.01g067300
>Glyma.01g067300.1 sequence-type=CDS polypeptide=Glyma.01g067300.1.p locus=Glyma.01g067300 id=Glyma.01g067300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTACATGAATTGCCACTGCCCGATGATGATGAAGGGTCTGAATTTGTGGGAAATTGATAGAAAAAGATTGGACTCATGGGAGGCAGCAAGAAACAATTGTGGGAGCTCAAAAGGCAACATTCAAGATGGAGCATGTGATATCGGGGAGCTGGTTGAAAAGAGTCATGGTGGCTGCAGGATGAAAATAAATGCAAAGTACAAAGCTCAGAAGAAGAAAAGTGATGACCAAGAACAGCTTCCTGAACCCATCAAAAGGAAACAGACTCTTTCTACAGAAAGGTTATTGGGCTTTAATCCTAAGTATGCTCATCCTGACCGGATGATTTTACAAGTTCTTCCAATTCCTCCTCAAATCGCAAGGCCTTCTATAATGATGGACACATCCTCTAGGAGTGAGGATGATATAACTCATCAACTGGCCATGATCATAAGGCACAATGAGAATCTGAAGAGACAAGAGAAGAATGGATCTCCTGCACATATTATATCTGAGTTTGTGCAGTTATTGCTTTTCCAAGTAGCAAAATACTTTGATAATGAGTTCAAATGGTTTATTGCATTTGAGATTTGA

>Glyma.01g067300.2 sequence-type=CDS polypeptide=Glyma.01g067300.2.p locus=Glyma.01g067300 id=Glyma.01g067300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTACATGAATTGCCACTGCCCGATGATGATGAAGGGTCTGAATTTGTGGGAAATTGATAGAAAAAGATTGGACTCATGGGAGGCAGCAAGAAACAATTGTGGGAGCTCAAAAGGCAACATTCAAGATGGAGCATGTGATATCGGGGAGCTGGTTGAAAAGAGTCATGGTGGCTGCAGGATGAAAATAAATGCAAAGTACAAAGCTCAGAAGAAGAAAAGTGATGACCAAGAACAGCTTCCTGAACCCATCAAAAGGAAACAGACTCTTTCTACAGAAAGGTTATTGGGCTTTAATCCTAAGTATGCTCATCCTGACCGGATGATTTTACAAGTTCTTCCAATTCCTCCTCAAATCGCAAGGCCTTCTATAATGATGGACACATCCTCTAGGAGTGAGGATGATATAACTCATCAACTGGCCATGATCATAAGGCACAATGAGAATCTGAAGAGACAAGAGAAGAATGGATCTCCTGCACATATTATATCTGAGTTTGTGCAGTTATTGCTTTTCCAAGTAGCAAAATACTTTGATAATGAGTTCAAATGGTTTATTGCATTTGAGATTTGA
Predicted protein sequences of Glyma.01g067300
>Glyma.01g067300.1.p sequence-type=predicted peptide transcript=Glyma.01g067300.1 locus=Glyma.01g067300 id=Glyma.01g067300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPYMNCHCPMMMKGLNLWEIDRKRLDSWEAARNNCGSSKGNIQDGACDIGELVEKSHGGCRMKINAKYKAQKKKSDDQEQLPEPIKRKQTLSTERLLGFNPKYAHPDRMILQVLPIPPQIARPSIMMDTSSRSEDDITHQLAMIIRHNENLKRQEKNGSPAHIISEFVQLLLFQVAKYFDNEFKWFIAFEI*

>Glyma.01g067300.2.p sequence-type=predicted peptide transcript=Glyma.01g067300.2 locus=Glyma.01g067300 id=Glyma.01g067300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPYMNCHCPMMMKGLNLWEIDRKRLDSWEAARNNCGSSKGNIQDGACDIGELVEKSHGGCRMKINAKYKAQKKKSDDQEQLPEPIKRKQTLSTERLLGFNPKYAHPDRMILQVLPIPPQIARPSIMMDTSSRSEDDITHQLAMIIRHNENLKRQEKNGSPAHIISEFVQLLLFQVAKYFDNEFKWFIAFEI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo