SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g062300

Feature Type:gene_model
Chromosome:Gm01
Start:8622369
stop:8623630
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g062300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G13690.1AT ATE1 JGI N/AIEA
5.2.1.8EC peptidylprolyl isomerase JGI N/AIEA
GO:0006457GO-bp protein folding JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003755GO-mf peptidyl-prolyl cis-trans isomerase activity JGI N/AIEA
K09564KEGG Chaperones and folding catalysts JGI N/AIEA
PTHR11071PantherFam PEPTIDYL-PROLYL CIS-TRANS ISOMERASE JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.01g062300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g07800 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g062300
>Glyma.01g062300.2 sequence-type=CDS polypeptide=Glyma.01g062300.2.p locus=Glyma.01g062300 id=Glyma.01g062300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGATGATGCAAGGTGTGCAGAAGAACACGCTATACGTGGGAGGCTTAGCGGAAGAAGTGAACGAGTTGATCCTCCACGCGGCGTTCATTCCCTTCGGCGACATCAAGGACGTGAAGACGCCGCTGGACCAGGCCTCGCAGAAGCACCGCTCCTTCGGCTTCGTCACCTTCCTCGAACGGGAAGATGCCTCCGCCGCCATGGACAACATGGACGGCGCCGAGCTCTACGGCCGCGTCCTCACCGTCAACTACGCCCTCCCCGAACGCATCAAGGGAGGGGAGCAGGGCTGGGCCGCCCAGCCCGTTTGGGCGGATGCGGATACCTGGTTTGAGCGGCAGCAGCAGGAGGAAGAGATGAAACGGATTGAGAAGGAGAATCGTGCGGCGATGGAGGCGGCAGAAGACTTGCACCGGAAGCAAGTGGCAGAGCAGCGAGAGGGAGAGAAGGAAGAGGAAATTGAGATCAAGGATGATCCTATGGCCAAGGCTGAAGCGGAGGTTCTTCAAAACCAATGA
Predicted protein sequences of Glyma.01g062300
>Glyma.01g062300.2.p sequence-type=predicted peptide transcript=Glyma.01g062300.2 locus=Glyma.01g062300 id=Glyma.01g062300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAMMQGVQKNTLYVGGLAEEVNELILHAAFIPFGDIKDVKTPLDQASQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFERQQQEEEMKRIEKENRAAMEAAEDLHRKQVAEQREGEKEEEIEIKDDPMAKAEAEVLQNQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo