SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.01g054200

Feature Type:gene_model
Chromosome:Gm01
Start:6962921
stop:6966373
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G69390.1AT ARC12,ATMINE1,MINE1 JGI N/AIEA
GO:0032955GO-bp regulation of division septum assembly JGI N/AIEA
GO:0051301GO-bp cell division JGI N/AIEA
PTHR33404PantherFam CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC JGI N/AIEA
PTHR33404:SF2PantherFam CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC JGI N/AIEA
PF03776Pfam Septum formation topological specificity factor MinE JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma01g06620 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.01g054200.1 sequence-type=CDS polypeptide=Glyma.01g054200.1.p locus=Glyma.01g054200 id=Glyma.01g054200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGATTTCCGGCGATCTCAGAGTCTCTGCAACACTTCCTCTCTATCGCTCCCACTCGCCTCCACTTCGAACCTCTTCTCTCCCTTCCCCCAAGGTAGATTTTCATCCTTTCTTGAAAGGGGCATGTAGCATCTCTGAATTCACCCCAAAATGCCCTTGCCTAACAATTGTACGATGCAATAAGCGTGGGTATTGCAAGCCAGTTTCTGCGGTCTTTGGAGGTCCTAAATTTACATCAGATTCTGTTAGCCAAGAAGCCGAGAACTTTCTCCTTGACGCTGTTAAAATGAACTTCTTTGAGCGGTTAAATTTGGCTTGGAAGATAATTTTCCCATCGGCAACATCTAGGAAAACCTCCAATGCTAGGATTGCCAAGCAACGCTTGAAGATGATTTTGTTCTCTGATCGGTGTGAAGTAAGTGATGAGGCAAAGCGAAAAATTGTAAGCAATGTTGTGCGTGCTCTATCAGATTTTGTGGAAATAGAATCACAGGATAAAGTTCAGCTGAGTGTCTCTGCTGATACAGATCTTGGAACTATTTACTCTGTCACTGTCCCTGTACGGCGGGTTAAGCCAGAATATCAAGAAATGGATGAATTTGGGACAATAACAAATGTTGAGTATAAGGACACTGGAGAGAGTTCTGGTTCTGTTGATGTTAGATTTGATTTCTATGTTGCAGACGAAAGTTCTTGA

>Glyma.01g054200.1.p sequence-type=predicted peptide transcript=Glyma.01g054200.1 locus=Glyma.01g054200 id=Glyma.01g054200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAISGDLRVSATLPLYRSHSPPLRTSSLPSPKVDFHPFLKGACSISEFTPKCPCLTIVRCNKRGYCKPVSAVFGGPKFTSDSVSQEAENFLLDAVKMNFFERLNLAWKIIFPSATSRKTSNARIAKQRLKMILFSDRCEVSDEAKRKIVSNVVRALSDFVEIESQDKVQLSVSADTDLGTIYSVTVPVRRVKPEYQEMDEFGTITNVEYKDTGESSGSVDVRFDFYVADESS*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo