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Report for Sequence Feature Glyma.01g054000

Feature Type:gene_model
Chromosome:Gm01
Start:6945017
stop:6946819
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g054000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G13950.1AT ATELF5A-1,EIF-5A,EIF5A,ELF5A-1 JGI N/AIEA
GO:0006452GO-bp translational frameshifting JGI N/AIEA
GO:0045901GO-bp positive regulation of translational elongation JGI N/AIEA
GO:0045905GO-bp positive regulation of translational termination JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0003746GO-mf translation elongation factor activity JGI N/AIEA
GO:0043022GO-mf ribosome binding JGI N/AIEA
K03263KEGG Translation factors JGI N/AIEA
KOG3271 KOG Translation initiation factor 5A (eIF-5A) JGI N/AIEA
PTHR11673PantherFam TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER JGI N/AIEA
PF01287Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold JGI N/AIEA

Gene model name correspondences to Glyma.01g054000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g06600 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g054000
>Glyma.01g054000.1 sequence-type=CDS polypeptide=Glyma.01g054000.1.p locus=Glyma.01g054000 id=Glyma.01g054000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCAGACGAGGAACACCACTTCGAGTCAAAGGCTGATGCTGGGGCATCAAAGACATTTCCCCAGCAAGCTGGAACCATCCGCAAAAATGGTTACATTGTCATCAAGAACAGGCCATGCAAGGTTGTGGAGGTTTCCACTTCCAAAACTGGCAAGCATGGACACGCAAAGTGTCACTTTGTTGGAATTGACATATTCACTGGGAAAAAGCTTGAGGATATTGTCCCATCTTCCCATAACTGTGATGTTCCTCATGTTAATCGCATTGACTACCAGCTCATCGACATCTCAGAGGATGGGTTTGTGAGTCTGCTGACTGAGACTGGTGGTACTAAGGATGACCTTAGGCTTCCAACCGATGAAAATCTGCTTACGCAGATCAAGGATGGATTTGCTGAGGGCAAAGATCTGGTTGTGTCTGTTATGTCTTCCATGGGTGAGGAGCAGATTTGTGCCCTTAAGGATATTGGCCCCAAGTAA
Predicted protein sequences of Glyma.01g054000
>Glyma.01g054000.1.p sequence-type=predicted peptide transcript=Glyma.01g054000.1 locus=Glyma.01g054000 id=Glyma.01g054000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVPHVNRIDYQLIDISEDGFVSLLTETGGTKDDLRLPTDENLLTQIKDGFAEGKDLVVSVMSSMGEEQICALKDIGPK*






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