SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g053100

Feature Type:gene_model
Chromosome:Gm01
Start:6608687
stop:6614655
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g053100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G69440.1AT AGO7,ZIP JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K11593KEGG Chromosome and associated proteins JGI N/AIEA
PTHR22891PantherFam EUKARYOTIC TRANSLATION INITIATION FACTOR 2C JGI N/AIEA
PTHR22891:SF9PantherFam PROTEIN ARGONAUTE 7 JGI N/AIEA
PF02170Pfam PAZ domain JGI N/AIEA
PF02171Pfam Piwi domain JGI N/AIEA
PF08699Pfam Argonaute linker 1 domain JGI N/AIEA
PF16486Pfam N-terminal domain of argonaute JGI N/AIEA
PF16488Pfam Argonaute linker 2 domain JGI N/AIEA

Gene model name correspondences to Glyma.01g053100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g06370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g053100
>Glyma.01g053100.1 sequence-type=CDS polypeptide=Glyma.01g053100.1.p locus=Glyma.01g053100 id=Glyma.01g053100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGAGACAGATGAGTCAACCAATGCTAACCAGAAATTCGCCATCAAAAGAAGGAGCTTCAGGAATGGAGGCAACTCTCATGAGCATCATCATTATCACCATCATCACCACCACCACCACCATCATCATCACTATCAGCACCACCATCATCATCAGCTGCTACAATACTCAAATCAGCTTGGTTTCTGCAACAACCAGAACAAGTTTCAGAGATACTACCCAGCTCTTCTGCCTCTACCTTCTCTTATACCTCTTCAACAACTTCCTTTGACTCCACCCTTCCCTCAGAACCACACTATCAAATCAAAAACCCATTTGCACAAACCTCCATGCATGCTCAATAGCTCCCCCTCCTCAGATTACAAGCTCTCTCAACTACCACTTAATCCTGCTCCAAAAGAACTTCAGCAGCAATCAAAGGCATCCTTGAAAGGAGATGATGGGAAGAAACTCATTCCAGCAAGGAAGCCACATGCAGTACTTGTTGCAAGTAGGCCAGACTCTGGTGGCAGAGAAGGCTCTGTGATCTCTCTTCTTGCCAACCACTTTTTGGTGCAATTTGATCCATCACAGAAGATATATCATTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATGTTGCCAGAGCAATCAAGCAGAAGTTGGTAAATAACAATTCTGCAGTCCTCTCAGGTGCTACTCCAGCATATGATGGTAGAAAGAATCTTTATAGTCCAGTTGAATTCCAAAATGACAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAGTTGAATTCACCTTATGGAGAAATGCCTGATTTGAAAGAGAAGCATGAACAGCTTAAACTTTTCAGGATAAATGTCAAGTTGGTCTCAAAGATCAATGGGAAGGAGTTGAGTAATTACTTGAGCAACGAGGGTGATGATTGGATTCCACTTCCACAGGATTATCTGCATGCTTTGGATGTAGTTCTTAGGGAAAGTCCAACTGAGAAATGCATACCTGTAGGGAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGACATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCGGTAACTGCTTTCCATGAGAGCATAGGAGTGATTGCATACTTGCAGAAGCGCGTCGAGTTTCTTCGAGACCTGTCTCAAAGGAAGACAGCTCAATTAACTGGCGAAGAGAGGAAGGAAGTGGAGAAGGCGTTGAAGAGCATCAGGGTCTTTGTTTGCCACAGAGAAACTGTTCAGCGATATCGTGTCTATGGCTTGACTGAGGAGGTTACTGAAAATCTTTGGTTTGCTGACAGAGATGGGAAGAATCTGAGGTTGGTGAATTACTTTAAAGATCAATATAACTATGACATACAATTCAGAAAACTGCCATGCTTGCAAATTAGTAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTCCTTGGGAAACTGTCTGATGATCAAACAGCAAGAATACTCAAAATGGGCTGCCAAAGACCGGCAGAACGAAAAACCATTGTCGAAGGAGTCATGAGAGGAACTGTTGGGCCTACCAGTGGTGATCAGGAAAAAGAATTCAAACTCCAAGTATCAAGAGAAATGACAAAGTTGACTGGTAGAATTCTTCACCCTCCCAAACTAAAGCTTGGAGATGGAGGTCATGTAAGAAATCTGACTCCTTCGCGTCACGACCGCCAATGGAACCTTCTTGACGGCCATGTCTTTGAAGGAACTACTATTGAAAGGTGGGCACTAATTAGTTTTGGGGGCACACCTGAGCAGAAGTCCAATGTCCCCAGATTTATAAACCAGTTATGTCAAAGGTGTGAACAATTGGGCATTTTTCTCAACAAGAACACTGTTATTAGTCCCCAGTTTGAATCTATCCAAATTCTTAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACAGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCTGACTTGAAGCGAATTGCCGAGACAAGTGTTGGTGTCATGAGCCAATGCTGCCTGTACCCCAACCTCAACAAGTTGAGTTCACAATTTTTGGCTAATTTGGTCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCCTTATACAACTCATTGCCTTCGCAGTTACCGCGCCTCTTTCATATTGATGAGCCAGTGATATTCATGGGTGCTGATGTGACACATCCTCACCCTCTTGATGATGTCAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCGACAGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATCATCCAGGATCTCGGTGCAATGGTGGGGGAATTGCTTGATGATTTTTACCAGGAGGTAGAGAAACTCCCCAATAGAATCATTTTCTTCAGAGACGGGGTTAGTGAAACTCAGTTTTACAAAGTGCTGGAAGAGGAACTTCAATCCATCAGGTTTGCATGTTCAAGGTTTCCTGGCTACAAACCTACCATTACTTTTGCAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCAAAACAATTTTCTATATGAAAACATTCCTCCTGGGACTGTGGTTGATTCTGTGATCACTCATCCAAAGGAATTTGACTTCTATCTTTGTAGCCATTGGGGTGTTAAAGGAACAAGTAGGCCAACTCACTACCATGTCTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTACAGAAACTGGTTTACAACTTATGCTACACTTTTGTTAGGTGTACCAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCACACTTAGCTGCATATAGAGGCAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTGTTCCGAAGCACATCTACACTATCCAGAGCTGCTCCTCCAAAGACAGCAGCTCTACCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTATTGCTAG

>Glyma.01g053100.2 sequence-type=CDS polypeptide=Glyma.01g053100.2.p locus=Glyma.01g053100 id=Glyma.01g053100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACCATCTTGTTTCTTATACTGATTCAGCTCCAAAAGAACTTCAGCAGCAATCAAAGGCATCCTTGAAAGGAGATGATGGGAAGAAACTCATTCCAGCAAGGAAGCCACATGCAGTACTTGTTGCAAGTAGGCCAGACTCTGGTGGCAGAGAAGGCTCTGTGATCTCTCTTCTTGCCAACCACTTTTTGGTGCAATTTGATCCATCACAGAAGATATATCATTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATGTTGCCAGAGCAATCAAGCAGAAGTTGGTAAATAACAATTCTGCAGTCCTCTCAGGTGCTACTCCAGCATATGATGGTAGAAAGAATCTTTATAGTCCAGTTGAATTCCAAAATGACAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAGTTGAATTCACCTTATGGAGAAATGCCTGATTTGAAAGAGAAGCATGAACAGCTTAAACTTTTCAGGATAAATGTCAAGTTGGTCTCAAAGATCAATGGGAAGGAGTTGAGTAATTACTTGAGCAACGAGGGTGATGATTGGATTCCACTTCCACAGGATTATCTGCATGCTTTGGATGTAGTTCTTAGGGAAAGTCCAACTGAGAAATGCATACCTGTAGGGAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGACATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCGGTAACTGCTTTCCATGAGAGCATAGGAGTGATTGCATACTTGCAGAAGCGCGTCGAGTTTCTTCGAGACCTGTCTCAAAGGAAGACAGCTCAATTAACTGGCGAAGAGAGGAAGGAAGTGGAGAAGGCGTTGAAGAGCATCAGGGTCTTTGTTTGCCACAGAGAAACTGTTCAGCGATATCGTGTCTATGGCTTGACTGAGGAGGTTACTGAAAATCTTTGGTTTGCTGACAGAGATGGGAAGAATCTGAGGTTGGTGAATTACTTTAAAGATCAATATAACTATGACATACAATTCAGAAAACTGCCATGCTTGCAAATTAGTAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTCCTTGGGAAACTGTCTGATGATCAAACAGCAAGAATACTCAAAATGGGCTGCCAAAGACCGGCAGAACGAAAAACCATTGTCGAAGGAGTCATGAGAGGAACTGTTGGGCCTACCAGTGGTGATCAGGAAAAAGAATTCAAACTCCAAGTATCAAGAGAAATGACAAAGTTGACTGGTAGAATTCTTCACCCTCCCAAACTAAAGCTTGGAGATGGAGGTCATGTAAGAAATCTGACTCCTTCGCGTCACGACCGCCAATGGAACCTTCTTGACGGCCATGTCTTTGAAGGAACTACTATTGAAAGGTGGGCACTAATTAGTTTTGGGGGCACACCTGAGCAGAAGTCCAATGTCCCCAGATTTATAAACCAGTTATGTCAAAGGTGTGAACAATTGGGCATTTTTCTCAACAAGAACACTGTTATTAGTCCCCAGTTTGAATCTATCCAAATTCTTAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACAGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCTGACTTGAAGCGAATTGCCGAGACAAGTGTTGGTGTCATGAGCCAATGCTGCCTGTACCCCAACCTCAACAAGTTGAGTTCACAATTTTTGGCTAATTTGGTCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCCTTATACAACTCATTGCCTTCGCAGTTACCGCGCCTCTTTCATATTGATGAGCCAGTGATATTCATGGGTGCTGATGTGACACATCCTCACCCTCTTGATGATGTCAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCGACAGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATCATCCAGGATCTCGGTGCAATGGTGGGGGAATTGCTTGATGATTTTTACCAGGAGGTAGAGAAACTCCCCAATAGAATCATTTTCTTCAGAGACGGGGTTAGTGAAACTCAGTTTTACAAAGTGCTGGAAGAGGAACTTCAATCCATCAGGTTTGCATGTTCAAGGTTTCCTGGCTACAAACCTACCATTACTTTTGCAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCAAAACAATTTTCTATATGAAAACATTCCTCCTGGGACTGTGGTTGATTCTGTGATCACTCATCCAAAGGAATTTGACTTCTATCTTTGTAGCCATTGGGGTGTTAAAGGAACAAGTAGGCCAACTCACTACCATGTCTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTACAGAAACTGGTTTACAACTTATGCTACACTTTTGTTAGGTGTACCAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCACACTTAGCTGCATATAGAGGCAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTGTTCCGAAGCACATCTACACTATCCAGAGCTGCTCCTCCAAAGACAGCAGCTCTACCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTATTGCTAG
Predicted protein sequences of Glyma.01g053100
>Glyma.01g053100.1.p sequence-type=predicted peptide transcript=Glyma.01g053100.1 locus=Glyma.01g053100 id=Glyma.01g053100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEETDESTNANQKFAIKRRSFRNGGNSHEHHHYHHHHHHHHHHHHYQHHHHHQLLQYSNQLGFCNNQNKFQRYYPALLPLPSLIPLQQLPLTPPFPQNHTIKSKTHLHKPPCMLNSSPSSDYKLSQLPLNPAPKELQQQSKASLKGDDGKKLIPARKPHAVLVASRPDSGGREGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVARAIKQKLVNNNSAVLSGATPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLNSPYGEMPDLKEKHEQLKLFRINVKLVSKINGKELSNYLSNEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIAYLQKRVEFLRDLSQRKTAQLTGEERKEVEKALKSIRVFVCHRETVQRYRVYGLTEEVTENLWFADRDGKNLRLVNYFKDQYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPAERKTIVEGVMRGTVGPTSGDQEKEFKLQVSREMTKLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTPEQKSNVPRFINQLCQRCEQLGIFLNKNTVISPQFESIQILNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVMSQCCLYPNLNKLSSQFLANLVLKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDVSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLEEELQSIRFACSRFPGYKPTITFAVVQKRHHTRLFPFETDQSSTQNNFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAALPKLSENIKKLMFYC*

>Glyma.01g053100.2.p sequence-type=predicted peptide transcript=Glyma.01g053100.2 locus=Glyma.01g053100 id=Glyma.01g053100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNHLVSYTDSAPKELQQQSKASLKGDDGKKLIPARKPHAVLVASRPDSGGREGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVARAIKQKLVNNNSAVLSGATPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLNSPYGEMPDLKEKHEQLKLFRINVKLVSKINGKELSNYLSNEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIAYLQKRVEFLRDLSQRKTAQLTGEERKEVEKALKSIRVFVCHRETVQRYRVYGLTEEVTENLWFADRDGKNLRLVNYFKDQYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPAERKTIVEGVMRGTVGPTSGDQEKEFKLQVSREMTKLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTPEQKSNVPRFINQLCQRCEQLGIFLNKNTVISPQFESIQILNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVMSQCCLYPNLNKLSSQFLANLVLKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDVSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLEEELQSIRFACSRFPGYKPTITFAVVQKRHHTRLFPFETDQSSTQNNFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAALPKLSENIKKLMFYC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo