Report for Sequence Feature Glyma.01g051300
Feature Type: gene_model
Chromosome: Gm01
Start: 6060477
stop: 6062256
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.01g051300
Proteins Associated with Glyma.01g051300
Locus Gene Symbol Protein Name
NAC1 NAC domain protein NAC1
NAC003 NAC Transcription Factor gene 3
Expression Patterns of Glyma.01g051300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.01g051300
Paralog Evidence Comments
Glyma.02g109800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.01g051300 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma01g06150 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.01g051300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.01g051300.1 sequence-type=CDS polypeptide=Glyma.01g051300.1.p locus=Glyma.01g051300 ID=Glyma.01g051300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAATAGAACAAGCTCTGTACTCCCACCTGGCTTCAGGTTTCACCCCACTGATGAGGAACTAATTGTGTACTACCTTTGCAACCAAGCCTCATCAAGGCCATGCCCTGCATCAATCATTCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGATAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGCCCACGAGAGAGGAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACCGTGTCTGGGTATTGGAAGGCCACTGGGACAGATAAAGCAATCTATAGTGGGTCTAAGCATGTAGGGGTGAAGAAGGCTTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAATAGACAAGTTGGATCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATTTACAAGAAGAAGAATATTGGAAAATCAATGGAGGCAAAAGAGGACTACCCAATAGCCCAAATCAACCTTACACCAGCAAACAATAACAGTGAACAAGAATTGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGAAATGGATTACTTGGGTCCAATATCACATATATTACCTGATGCCTCATACAATTCAACCTTTGATTTTCAAATTAACACTGCCAATGGTGGAATAGACCCGTTCGTAAAACCACAGCTGGTTGAAATCCCTTATGCAACAGATTCAGGGAAGTACCAGGTGAAACAGAATAGCACCATCAACCCCACCATATTTGTGAACCAAGTGTATGATCAAAGAGGATAA
Predicted protein sequences of Glyma.01g051300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.01g051300.1.p sequence-type=predicted peptide transcript=Glyma.01g051300.1 locus=Glyma.01g051300 ID=Glyma.01g051300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MENRTSSVLPPGFRFHPTDEELIVYYLCNQASSRPCPASIIPEVDIYKFDPWELPDKTDFGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQVGSMRLDDWVLCRIYKKKNIGKSMEAKEDYPIAQINLTPANNNSEQELVKFPRTSSLTHLLEMDYLGPISHILPDASYNSTFDFQINTANGGIDPFVKPQLVEIPYATDSGKYQVKQNSTINPTIFVNQVYDQRG*