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Report for Sequence Feature Glyma.01g042300

Feature Type:gene_model
Chromosome:Gm01
Start:4604687
stop:4609561
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g042300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G02710.2AT PLP,PLPA,PLPB,PLPC JGI N/AIEA
2.7.11.1EC non-specific serine/threonine protein kinase JGI N/AIEA
PTHR24351PantherFam RIBOSOMAL PROTEIN S6 KINASE JGI N/AIEA
PF13426Pfam PAS domain JGI N/AIEA

Proteins Associated with Glyma.01g042300
LocusGene SymbolProtein Name
PLP2 proteolipid protein 2 (colonic epithelium-enriched)

Gene model name correspondences to Glyma.01g042300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g04920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g042300
>Glyma.01g042300.1 sequence-type=CDS polypeptide=Glyma.01g042300.1.p locus=Glyma.01g042300 id=Glyma.01g042300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGATGGAGCTGGAGCTAGGTTCAACAACTATCCAGCGATCCTTCAACACGCGCTACACGCGCCACGCGCGCGACTCGCTCGACGAATTGCCTGACAGCTTCACCATCACCGACCCCTCCATCCCTGGCCACCCCATCGTCTTCGCCAGCCCGGGCTTCCTCAAGCTCACGGGCTACGCGGCCCGTGAAGTCCTGGGCCGACCCGCCGCCATCTTCCAGGGCCCGCGAACTTCGAGAAAATCCGTCATTGAAATTCGCGAGGCCGTTAGAGAGGAGCGAAACGCGCAGGTCGTTCTGCTCAACTACCGCAAAGACGGCACGCCGTTTTGGATGCTTTTTCGTGTTTGCCCCGTTTTCAGCAGCGACGGTGGCGCCGTCGTGCACTTTGTTGCCGTACAGGTGCCGCTTCAGAAAAAGGAAGGGTCTGGAGTGAGGGATTTCGGGTTCGGGTGCTGTCGGAAGGAAGTATGCGCCGATTCGTTGGCGGAGATTGGTCGCGTTTGTTCATTAGAGCAAGTGCTGGAACCTGACGTTAGAGAATTGGAGAGAGAAGAGCCGTGTGAGGCAAGTGATGAGGAGAAGCGTAGTGCAGTTAATGCTATGGACAATATATTTTCTGTGCTAACCCATTATAGTGAGGCGACGGGCAGATTGGTGTGTCAAAAGAGATGCAGCATTCCTGATGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCGTTTATCAGACATGCCTATTGTTTATGCTAGTGATGCCTTCTTGAAATTGACAGGTTATGCAAAAAATGAAGTTTTGGGCCGCAACTGTAGATTTTTAGGTGGAACAGATACTGATACCTCGACATTACATCTGATAAGGGAGAGCATTAAAACAGAACAACCCTGCACAGTACGTATTTTGAATTACAGGAAGGACAAAAGCTCATTTTGGAATTTTCTTCATATCTCACCCGTTCGTGATGCTTCTGGCAAGGTTGCATACTTTGTGGGAGTTCAAATAGAAGACAGCAATAAAAACGATGATAGCCATTGTTTGAGTCCTGAGAAGAGGCAGCTTAATGTGGTTGGTGTAGTCAAGGTTGCAGTGAGGAGTTTATCAATGACTGTGGGATCTTCCAAGTCGTAG

>Glyma.01g042300.2 sequence-type=CDS polypeptide=Glyma.01g042300.2.p locus=Glyma.01g042300 id=Glyma.01g042300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGATGGAGCTGGAGCTAGGTTCAACAACTATCCAGCGATCCTTCAACACGCGCTACACGCGCCACGCGCGCGACTCGCTCGACGAATTGCCTGACAGCTTCACCATCACCGACCCCTCCATCCCTGGCCACCCCATCGTCTTCGCCAGCCCGGGCTTCCTCAAGCTCACGGGCTACGCGGCCCGTGAAGTCCTGGGCCGACCCGCCGCCATCTTCCAGGGCCCGCGAACTTCGAGAAAATCCGTCATTGAAATTCGCGAGGCCGTTAGAGAGGAGCGAAACGCGCAGGTCGTTCTGCTCAACTACCGCAAAGACGGCACGCCGTTTTGGATGCTTTTTCGTGTTTGCCCCGTTTTCAGCAGCGACGGTGGCGCCGTCGTGCACTTTGTTGCCGTACAGGTGCCGCTTCAGAAAAAGGAAGGGTCTGGAGTGAGGGATTTCGGGTTCGGGTGCTGTCGGAAGGAAGTATGCGCCGATTCGTTGGCGGAGATTGGTCGCGTTTGTTCATTAGAGCAAGTGCTGGAACCTGACGTTAGAGAATTGGAGAGAGAAGAGCCGTGTGAGGCAAGTGATGAGGAGAAGCGTAGTGCAGTTAATGCTATGGACAATATATTTTCTGTGCTAACCCATTATAGTGAGGCGACGGGCAGATTGGTGTGTCAAAAGAGATGCAGCATTCCTGATGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCGTTTATCAGACATGCCTATTGTTTATGCTAGTGATGCCTTCTTGAAATTGACAGGTTATGCAAAAAATGAAGTTTTGGGCCGCAACTGTAGATTTTTAGGTGGAACAGATACTGATACCTCGACATTACATCTGATAAGGGAGAGCATTAAAACAGAACAACCCTGCACAGTACGTATTTTGAATTACAGGAAGGACAAAAGCTCATTTTGGAATTTTCTTCATATCTCACCCGTTCGTGATGCTTCTGGCAAGGATTTTTCCACACTCTCCTTTTCGTTGTGGCTAGAAGGATGA

>Glyma.01g042300.4 sequence-type=CDS polypeptide=Glyma.01g042300.4.p locus=Glyma.01g042300 id=Glyma.01g042300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGATGGAGCTGGAGCTAGGTTCAACAACTATCCAGCGATCCTTCAACACGCGCTACACGCGCCACGCGCGCGACTCGCTCGACGAATTGCCTGACAGCTTCACCATCACCGACCCCTCCATCCCTGGCCACCCCATCGTCTTCGCCAGCCCGGGCTTCCTCAAGCTCACGGGCTACGCGGCCCGTGAAGTCCTGGGCCGACCCGCCGCCATCTTCCAGGGCCCGCGAACTTCGAGAAAATCCGTCATTGAAATTCGCGAGGCCGTTAGAGAGGAGCGAAACGCGCAGGTCGTTCTGCTCAACTACCGCAAAGACGGCACGCCGTTTTGGATGCTTTTTCGTGTTTGCCCCGTTTTCAGCAGCGACGGTGGCGCCGTCGTGCACTTTGTTGCCGTACAGGTGCCGCTTCAGAAAAAGGAAGGGTCTGGAGTGAGGGATTTCGGGTTCGGGTGCTGTCGGAAGGAAGTATGCGCCGATTCGTTGGCGGAGATTGGTCGCGTTTGTTCATTAGAGCAAGTGCTGGAACCTGACGTTAGAGAATTGGAGAGAGAAGAGCCGTGTGAGGCAAGTGATGAGGAGAAGCGTAGTGCAGTTAATGCTATGGACAATATATTTTCTGTGCTAACCCATTATAGTGAGGCGACGGGCAGATTGGTGTGTCAAAAGAGATGCAGCATTCCTGATGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCGTTTATCAGACATGCCTATTGTTTATGCTAGTGATGCCTTCTTGAAATTGACAGGTTATGCAAAAAATGAAGTTTTGGGCCGCAACTGTAGATTTTTAGGTGGAACAGATACTGATACCTCGACATTACATCTGATAAGGGAGAGCATTAAAACAGAACAACCCTGCACAGAAGGACAAAAGCTCATTTTGGAATTTTCTTCATATCTCACCCGTTCGTGA
Predicted protein sequences of Glyma.01g042300
>Glyma.01g042300.1.p sequence-type=predicted peptide transcript=Glyma.01g042300.1 locus=Glyma.01g042300 id=Glyma.01g042300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPMELELGSTTIQRSFNTRYTRHARDSLDELPDSFTITDPSIPGHPIVFASPGFLKLTGYAAREVLGRPAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRKDGTPFWMLFRVCPVFSSDGGAVVHFVAVQVPLQKKEGSGVRDFGFGCCRKEVCADSLAEIGRVCSLEQVLEPDVRELEREEPCEASDEEKRSAVNAMDNIFSVLTHYSEATGRLVCQKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPRLSDMPIVYASDAFLKLTGYAKNEVLGRNCRFLGGTDTDTSTLHLIRESIKTEQPCTVRILNYRKDKSSFWNFLHISPVRDASGKVAYFVGVQIEDSNKNDDSHCLSPEKRQLNVVGVVKVAVRSLSMTVGSSKS*

>Glyma.01g042300.2.p sequence-type=predicted peptide transcript=Glyma.01g042300.2 locus=Glyma.01g042300 id=Glyma.01g042300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPMELELGSTTIQRSFNTRYTRHARDSLDELPDSFTITDPSIPGHPIVFASPGFLKLTGYAAREVLGRPAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRKDGTPFWMLFRVCPVFSSDGGAVVHFVAVQVPLQKKEGSGVRDFGFGCCRKEVCADSLAEIGRVCSLEQVLEPDVRELEREEPCEASDEEKRSAVNAMDNIFSVLTHYSEATGRLVCQKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPRLSDMPIVYASDAFLKLTGYAKNEVLGRNCRFLGGTDTDTSTLHLIRESIKTEQPCTVRILNYRKDKSSFWNFLHISPVRDASGKDFSTLSFSLWLEG*

>Glyma.01g042300.4.p sequence-type=predicted peptide transcript=Glyma.01g042300.4 locus=Glyma.01g042300 id=Glyma.01g042300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPMELELGSTTIQRSFNTRYTRHARDSLDELPDSFTITDPSIPGHPIVFASPGFLKLTGYAAREVLGRPAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRKDGTPFWMLFRVCPVFSSDGGAVVHFVAVQVPLQKKEGSGVRDFGFGCCRKEVCADSLAEIGRVCSLEQVLEPDVRELEREEPCEASDEEKRSAVNAMDNIFSVLTHYSEATGRLVCQKRCSIPDVGLLSTSLIISLGRIKQSFVLTNPRLSDMPIVYASDAFLKLTGYAKNEVLGRNCRFLGGTDTDTSTLHLIRESIKTEQPCTEGQKLILEFSSYLTRS*






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