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Report for Sequence Feature Glyma.01g040900

Feature Type:gene_model
Chromosome:Gm01
Start:4387738
stop:4394488
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g040900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G32490.1AT EMB2733,ESP3 JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0004386GO-mf helicase activity JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
PTHR18934PantherFam ATP-DEPENDENT RNA HELICASE JGI N/AIEA
PF00270Pfam DEAD/DEAH box helicase JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA
PF04408Pfam Helicase associated domain (HA2) JGI N/AIEA
PF07717Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold JGI N/AIEA

Gene model name correspondences to Glyma.01g040900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g04791 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g040900
>Glyma.01g040900.4 sequence-type=CDS polypeptide=Glyma.01g040900.4.p locus=Glyma.01g040900 id=Glyma.01g040900.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATAATGATGACAGTCTAAAGAATTGGGTATCCGACAAATTGATGTCTCTATTAGGATATTCTCAGCCCACCCTTGTTCGGTACATGATCGGACTATCCCACCAAGCTTCTTCACCGGCTCATTTGGTTGACAAACTAGTGGAGTTTCGGATCCCATCATCAAGCGACACTCGCGCATTCGCGGAGGAAATTTTTTCTAGGGTTCCTCGTGTACCATCGAGTTTGAATCAGTATCAGAAACAAGAGAGGGAGGCTGCAATACTGGCAAGGAAGCAGAAGACTTACACAATTTTAAAGGCTGATGACAATAGTGACCATGCATATGCATATAAATCTAGAAAGCCTGATAATCGTAGCAAACGTTTCAGGAAGAAATCAGAAGTTCACGATGATGAGGGAATTGCGAGAAAGGAGAGGGGGAGACAAGTTAAGAGAAGAATTTCCCCTCATAAAGATAATCATTCAGATTCAGAAGAAGAAGAAGAAATATTGGAAGATCAAAGAGAGAAGAAGGAATTAGAGCGGCATATGAGAGAAAGAGACGAAGCAGTGACACGGAAGTTGGTGACTGAACCGAGATTAACGCGAAAGGAGAAAGAAGAGGCCATTCGAAGATCTAATGCTGCAGAGAATGATGACATTCAAACCTTGAGAAATTTTTCGAGGCAAGAATACTTGAAGAAAAGGGAGGAAAAGAAATTGCTACAACTGAGAGATGATATAGAAGATGAGCAATATCTGTTTGAAGGTGTTGAGCTTTCAGAAGCAGAATTATGCAAACTGAGGTACGATAAAGAGATGTATGAGCTTGTGAAGAAGCGGTCGAAAGAGGATGATAATGTGAATGAGTACTATAGAATGCCAGAAGCTTATGATCATGAAGGCGGTGTTAACCAGGAGAAGAGGTTTTCTGTGGCTATGCAGCGTTACAGGGATCCAAATGCTGAGGATAAGATGAATCCATTCGCCGAACAGGAGGCCTTGGAGGAACGTCAAATTCGAAAGGCAACGTTGAAGTTTGACTCAAGAAATAGAAAACAAGCCTTTGATGAGTATCAGTTTGTGTTTGATGATCAGATTGATTTTGTCAAGACATCGGTAATAGATGGAGATAAGTTTGATTATGAAGAGATGGTGGAAGATTCACATGAAAAGTCCAGAGCAAAGACAGCTAGGGAAGCACTTCAGGAAGAGAGGGAAAAGCTACCCATTTACCCTTATCGGGAGCAATTGCTCCAAGCTGTTCACGATCACCAGGTACTTATCATTGATGGTGAAACTGGTTCGGGGAAGACTACACAAATTCCTCAATACCTTCATGAAGCGGGCTACACAAAACATGGAATGGTTGCGTGTACTCAGCCGCGACGCCTTGCTGCTATAAGTGTTGCTGCTCGAGTTTCCAAAGAAATGGGTGTTAAATTAGGACATGAGGTTGGCTACTCCATCCGTTTTGAAGATTGTACAACAGATAAGACAGTGATTAAATACATGACAGATGGAATGTTGCTGAGGGAATTCCTTGGTGAACCTGATTTGGCAAGTTATAGTGTTTTGATCGTGGATGAGGCTCACGAAAGAACACTATCAACAGATATTCTGTTTGGATTAGTAAAGGATATTGCTCGTTTCAGACCTGATCTCAAGTTGCTGATATCAAGTGCTACACTTGATGCTGACAAGTTCAGCGATTACTTTGATTCTGCACCAAAATTCAAAATTCCAGGGAGACGGTATCCTTATGAAATATTTAACTTTACCGAAGCACCAAGTGACTACTTAGATGCAGCAATTGAGGCCTCACTCAAAATCCATGTCACTGAACCTCCTGGAGATATATTGGTATTCCTTACGGGTCAAGAAGAAATTGAAACAGCTGAAGAAAACTTGAAGCATCGGATCAGAGGCTTGGGGACTAAGATTGGTGAGTTAAAAATCTGCCCTATATATGCCAACCTACCAACTGAACTTCAAGCTAAAATATTTGATCCCACTCCTGAAAGGGTGCGAAAGGTTGTCCTTGCTACTAATATTGCAGAAACGTCATTGACAATTGATGGCATCAAGTATGTCATTGATCCAGGATATTGTAAGATGAAGAGTTATAATCCAAGAACCGGAATGGAGTCTTTGAAAGTAACTCCAATCTCAAAAGCTTCAGCTATGCAAAGAGCCGGTCGTTGTGGAAGAACAGGTCCTGGTAAGTGCTTCCAACTGTATACTGCATATACTTTTCACAAGGAAATGGACGATAACACTGTACCAGAAATACAGCGGACTAACCTTGCAAATGTGGTTTTAACTTTAAAATGTCTTGGTATTGACAATGTAATGCATTTTGATTTTATGGATCCTCCATCTGATGATGCCTTATTGAAAGCTCTTGAGCTTTTATATGCATTAAGTGCATTGAATAAGTTTGGTGAGTTAACTAAGGTTGGTAGACGGATGGCAGAGTTCCCTCTTGATCCTACATTGTCAAAAATGATAGTGGCCTCAGAAAAGTTCAAGTGTTCAGATGATATAATCTCTATTGCTGCTATGCTTTCTGTTGGTAAGTCAATATTCTACCGTCCAAAGGATAAACAAGTATATGCAGACAATGCAATGAGGAATTTTCACACTGGAAATGTTGGAGACCATATTGCATTACTAAGGGTCTACAATTCATGGAAGGAGACCAATTATTCAACACAATGGTGTTATGAAAATTACATACAGGTAAGGAGCATGAGACAGGCTAGGGATATCCGTGATCAACTTGCAGGTCTTTTAGAGAGGGTTGAGATCGAACTAACTTCAAATTCTAGTGATTTCGATGCCATCAAGAAATCCATTACATCTGGGTTTTTCCCACACTCTGCGAGACTGCAAAAGTATGGAATATATAAGACTGTTAAACAATCACAGAATGTTCGCATACACCCTGGTTCGGGGCTGGCGCAGGTTCTTCCTAGATGGGTTGTATACCATGAACTAGTACTCACAACCAAGGAATATATGAGGCAGGTGACAGAGATAAATCCAGGGTGGCTGGCGGAGATAGCCCCTCACTATTACCAGCTGAAGGATGTTGAAGATTCATATTCCAACTAG

>Glyma.01g040900.5 sequence-type=CDS polypeptide=Glyma.01g040900.5.p locus=Glyma.01g040900 id=Glyma.01g040900.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATAATGATGACAGTCTAAAGAATTGGGTATCCGACAAATTGATGTCTCTATTAGGATATTCTCAGCCCACCCTTGTTCGGTACATGATCGGACTATCCCACCAAGCTTCTTCACCGGCTCATTTGGTTGACAAACTAGTGGAGTTTCGGATCCCATCATCAAGCGACACTCGCGCATTCGCGGAGGAAATTTTTTCTAGGGTTCCTCGTGTACCATCGAGTTTGAATCAGTATCAGAAACAAGAGAGGGAGGCTGCAATACTGGCAAGGAAGCAGAAGACTTACACAATTTTAAAGGCTGATGACAATAGTGACCATGCATATGCATATAAATCTAGAAAGCCTGATAATCGTAGCAAACGTTTCAGGAAGAAATCAGAAGTTCACGATGATGAGGGAATTGCGAGAAAGGAGAGGGGGAGACAAGTTAAGAGAAGAATTTCCCCTCATAAAGATAATCATTCAGATTCAGAAGAAGAAGAAGAAATATTGGAAGATCAAAGAGAGAAGAAGGAATTAGAGCGGCATATGAGAGAAAGAGACGAAGCAGTGACACGGAAGTTGGTGACTGAACCGAGATTAACGCGAAAGGAGAAAGAAGAGGCCATTCGAAGATCTAATGCTGCAGAGAATGATGACATTCAAACCTTGAGAAATTTTTCGAGGCAAGAATACTTGAAGAAAAGGGAGGAAAAGAAATTGCTACAACTGAGAGATGATATAGAAGATGAGCAATATCTGTTTGAAGGTGTTGAGCTTTCAGAAGCAGAATTATGCAAACTGAGGTACGATAAAGAGATGTATGAGCTTGTGAAGAAGCGGTCGAAAGAGGATGATAATGTGAATGAGTACTATAGAATGCCAGAAGCTTATGATCATGAAGGCGGTGTTAACCAGGAGAAGAGGTTTTCTGTGGCTATGCAGCGTTACAGGGATCCAAATGCTGAGGATAAGATGAATCCATTCGCCGAACAGGAGGCCTTGGAGGAACGTCAAATTCGAAAGGCAACGTTGAAGTTTGACTCAAGAAATAGAAAACAAGCCTTTGATGAGTATCAGTTTGTGTTTGATGATCAGATTGATTTTGTCAAGACATCGGTAATAGATGGAGATAAGTTTGATTATGAAGAGATGGTGGAAGATTCACATGAAAAGTCCAGAGCAAAGACAGCTAGGGAAGCACTTCAGGAAGAGAGGGAAAAGCTACCCATTTACCCTTATCGGGAGCAATTGCTCCAAGCTGTTCACGATCACCAGGTACTTATCATTGATGGTGAAACTGGTTCGGGGAAGACTACACAAATTCCTCAATACCTTCATGAAGCGGGCTACACAAAACATGGAATGGTTGCGTGTACTCAGCCGCGACGCCTTGCTGCTATAAGTGTTGCTGCTCGAGTTTCCAAAGAAATGGGTGTTAAATTAGGACATGAGGTTGGCTACTCCATCCGTTTTGAAGATTGTACAACAGATAAGACAGTGATTAAATACATGACAGATGGAATGTTGCTGAGGGAATTCCTTGGTGAACCTGATTTGGCAAGTTATAGTGTTTTGATCGTGGATGAGGCTCACGAAAGAACACTATCAACAGATATTCTGTTTGGATTAGTAAAGGATATTGCTCGTTTCAGACCTGATCTCAAGTTGCTGATATCAAGTGCTACACTTGATGCTGACAAGTTCAGCGATTACTTTGATTCTGCACCAAAATTCAAAATTCCAGGGAGACGGTATCCTTATGAAATATTTAACTTTACCGAAGCACCAAGTGACTACTTAGATGCAGCAATTGAGGCCTCACTCAAAATCCATGTCACTGAACCTCCTGGAGATATATTGGTATTCCTTACGGGTCAAGAAGAAATTGAAACAGCTGAAGAAAACTTGAAGCATCGGATCAGAGGCTTGGGGACTAAGATTGGTGAGTTAAAAATCTGCCCTATATATGCCAACCTACCAACTGAACTTCAAGCTAAAATATTTGATCCCACTCCTGAAAGGGTGCGAAAGGTTGTCCTTGCTACTAATATTGCAGAAACGTCATTGACAATTGATGGCATCAAGTATGTCATTGATCCAGGATATTGTAAGATGAAGAGTTATAATCCAAGAACCGGAATGGAGTCTTTGAAAGTAACTCCAATCTCAAAAGCTTCAGCTATGCAAAGAGCCGGTCGTTGTGGAAGAACAGGTCCTGGTAAGTGCTTCCAACTGTATACTGCATATACTTTTCACAAGGAAATGGACGATAACACTGTACCAGAAATACAGCGGACTAACCTTGCAAATGTGGTTTTAACTTTAAAATGTCTTGGTATTGACAATGTAATGCATTTTGATTTTATGGATCCTCCATCTGATGATGCCTTATTGAAAGCTCTTGAGCTTTTATATGCATTAAGTGCATTGAATAAGTTTGGTGAGTTAACTAAGGTTGGTAGACGGATGGCAGAGTTCCCTCTTGATCCTACATTGTCAAAAATGATAGTGGCCTCAGAAAAGTTCAAGTGTTCAGATGATATAATCTCTATTGCTGCTATGCTTTCTGTTGGTAAGTCAATATTCTACCGTCCAAAGGATAAACAAGTATATGCAGACAATGCAATGAGGAATTTTCACACTGGAAATGTTGGAGACCATATTGCATTACTAAGGGTCTACAATTCATGGAAGGAGACCAATTATTCAACACAATGGTGTTATGAAAATTACATACAGGTAAGGAGCATGAGACAGGCTAGGGATATCCGTGATCAACTTGCAGGTCTTTTAGAGAGGGTTGAGATCGAACTAACTTCAAATTCTAGTGATTTCGATGCCATCAAGAAATCCATTACATCTGGGTTTTTCCCACACTCTGCGAGACTGCAAAAGTATGGAATATATAAGACTGTTAAACAATCACAGAATGTTCGCATACACCCTGGTTCGGGGCTGGCGCAGGTTCTTCCTAGATGGGTTGTATACCATGAACTAGTACTCACAACCAAGGAATATATGAGGCAGGTGACAGAGATAAATCCAGGGTGGCTGGCGGAGATAGCCCCTCACTATTACCAGCTGAAGGATGTTGAAGATTCATATTCCAACTAG
Predicted protein sequences of Glyma.01g040900
>Glyma.01g040900.4.p sequence-type=predicted peptide transcript=Glyma.01g040900.4 locus=Glyma.01g040900 id=Glyma.01g040900.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDNDDSLKNWVSDKLMSLLGYSQPTLVRYMIGLSHQASSPAHLVDKLVEFRIPSSSDTRAFAEEIFSRVPRVPSSLNQYQKQEREAAILARKQKTYTILKADDNSDHAYAYKSRKPDNRSKRFRKKSEVHDDEGIARKERGRQVKRRISPHKDNHSDSEEEEEILEDQREKKELERHMRERDEAVTRKLVTEPRLTRKEKEEAIRRSNAAENDDIQTLRNFSRQEYLKKREEKKLLQLRDDIEDEQYLFEGVELSEAELCKLRYDKEMYELVKKRSKEDDNVNEYYRMPEAYDHEGGVNQEKRFSVAMQRYRDPNAEDKMNPFAEQEALEERQIRKATLKFDSRNRKQAFDEYQFVFDDQIDFVKTSVIDGDKFDYEEMVEDSHEKSRAKTAREALQEEREKLPIYPYREQLLQAVHDHQVLIIDGETGSGKTTQIPQYLHEAGYTKHGMVACTQPRRLAAISVAARVSKEMGVKLGHEVGYSIRFEDCTTDKTVIKYMTDGMLLREFLGEPDLASYSVLIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATLDADKFSDYFDSAPKFKIPGRRYPYEIFNFTEAPSDYLDAAIEASLKIHVTEPPGDILVFLTGQEEIETAEENLKHRIRGLGTKIGELKICPIYANLPTELQAKIFDPTPERVRKVVLATNIAETSLTIDGIKYVIDPGYCKMKSYNPRTGMESLKVTPISKASAMQRAGRCGRTGPGKCFQLYTAYTFHKEMDDNTVPEIQRTNLANVVLTLKCLGIDNVMHFDFMDPPSDDALLKALELLYALSALNKFGELTKVGRRMAEFPLDPTLSKMIVASEKFKCSDDIISIAAMLSVGKSIFYRPKDKQVYADNAMRNFHTGNVGDHIALLRVYNSWKETNYSTQWCYENYIQVRSMRQARDIRDQLAGLLERVEIELTSNSSDFDAIKKSITSGFFPHSARLQKYGIYKTVKQSQNVRIHPGSGLAQVLPRWVVYHELVLTTKEYMRQVTEINPGWLAEIAPHYYQLKDVEDSYSN*

>Glyma.01g040900.5.p sequence-type=predicted peptide transcript=Glyma.01g040900.5 locus=Glyma.01g040900 id=Glyma.01g040900.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDNDDSLKNWVSDKLMSLLGYSQPTLVRYMIGLSHQASSPAHLVDKLVEFRIPSSSDTRAFAEEIFSRVPRVPSSLNQYQKQEREAAILARKQKTYTILKADDNSDHAYAYKSRKPDNRSKRFRKKSEVHDDEGIARKERGRQVKRRISPHKDNHSDSEEEEEILEDQREKKELERHMRERDEAVTRKLVTEPRLTRKEKEEAIRRSNAAENDDIQTLRNFSRQEYLKKREEKKLLQLRDDIEDEQYLFEGVELSEAELCKLRYDKEMYELVKKRSKEDDNVNEYYRMPEAYDHEGGVNQEKRFSVAMQRYRDPNAEDKMNPFAEQEALEERQIRKATLKFDSRNRKQAFDEYQFVFDDQIDFVKTSVIDGDKFDYEEMVEDSHEKSRAKTAREALQEEREKLPIYPYREQLLQAVHDHQVLIIDGETGSGKTTQIPQYLHEAGYTKHGMVACTQPRRLAAISVAARVSKEMGVKLGHEVGYSIRFEDCTTDKTVIKYMTDGMLLREFLGEPDLASYSVLIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATLDADKFSDYFDSAPKFKIPGRRYPYEIFNFTEAPSDYLDAAIEASLKIHVTEPPGDILVFLTGQEEIETAEENLKHRIRGLGTKIGELKICPIYANLPTELQAKIFDPTPERVRKVVLATNIAETSLTIDGIKYVIDPGYCKMKSYNPRTGMESLKVTPISKASAMQRAGRCGRTGPGKCFQLYTAYTFHKEMDDNTVPEIQRTNLANVVLTLKCLGIDNVMHFDFMDPPSDDALLKALELLYALSALNKFGELTKVGRRMAEFPLDPTLSKMIVASEKFKCSDDIISIAAMLSVGKSIFYRPKDKQVYADNAMRNFHTGNVGDHIALLRVYNSWKETNYSTQWCYENYIQVRSMRQARDIRDQLAGLLERVEIELTSNSSDFDAIKKSITSGFFPHSARLQKYGIYKTVKQSQNVRIHPGSGLAQVLPRWVVYHELVLTTKEYMRQVTEINPGWLAEIAPHYYQLKDVEDSYSN*






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