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Report for Sequence Feature Glyma.01g036900

Feature Type:gene_model
Chromosome:Gm01
Start:3913409
stop:3915026
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g036900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G59970.1AT JGI N/AIEA
3.4.24.7EC interstitial collagenase JGI N/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0031012GO-cc extracellular matrix JGI N/AIEA
GO:0004222GO-mf metalloendopeptidase activity JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
PTHR10201PantherFam MATRIX METALLOPROTEINASE JGI N/AIEA
PF00413Pfam Matrixin JGI N/AIEA
PF01471Pfam Putative peptidoglycan binding domain JGI N/AIEA

Proteins Associated with Glyma.01g036900
LocusGene SymbolProtein Name
MMP2 Matrix metalloproteinase 2 gene

Gene model name correspondences to Glyma.01g036900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g04350 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g036900
>Glyma.01g036900.1 sequence-type=CDS polypeptide=Glyma.01g036900.1.p locus=Glyma.01g036900 id=Glyma.01g036900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAAATCTTCTTCACATCTTTCTGCAATATTCCTATTGTTCTTTCTCCTTACTGCCCTATCCCCTTCGGATGGAGTTTCATTCTCTTCATTCCTAAAGCAATTAAAACAGAAGCTGGAGAAGAGTCCCACCCTAAAAGATTTCCTGAAACCCACCACTATAGGGGATATTTATTATACGTTGAATTTCACAGAAATCTTCTCTTCCGAAGAGAGAAGCGCACCACCGGTGTCTCTCATCAAAGATTACTTATCAAACTACGGCTACATTGAATCCTCTGGGCCATTGAGCAATTCGATGGACCAAGAAACAATAATATCAGCCATTAAGACCTACCAGCAATATTTCAGTTTGCAACCCACCGGCAAACTAAACAACGAGACTCTTCAGCAAATGTCGTTCCTACGATGTGGCGTCCCCGACATTAACATTGACTACAACTTCACCGACGACAACATGTCATATCCGAAAGCCGGTCACCGGTGGTTCCCCCACACAAACCTCACATACGGTTTTCTTCCTGAAAACCAAATCCCAGCCAACATGACCAAGGTGTTTAGAGATTCCTTCGCTCGGTGGGCCCAGGCCTCTGGGGTTTTGAATCTCACCGAGACAACCTACGACAACGCCGACATCCAAGTAGGGTTCTACAACTTCACTTACTTAGGAATTGATATCGAGGTGTATGGTGGCAGCCTTATATTTTTGCAACCCGATTCTACCAAGAAAGGGGTTATACTTCTCGACGGTACCAATAAGTTGTGGGCTCTTCCCAGTGAAAACGGTAGGTTGTCGTGGGAGGAAGGAGTTTTGGACTTGGAGAGTGCGGCAATGCACGAGATAGGGCATTTACTAGGGCTTGACCACTCTAACAAAGAGGACTCTGTTATGTACCCTTGCATATTGCCTTCACACCAACGAAAGGTGCAGCTCTCGAAATCTGATAAGACCAACGTTCAGCATCAGTTTGCTAACGTAGAGGACTCTGCAGGCCACGTAGGGCGTTTGGGAGTGAGTTTAATTACCACTTTGTCTCTTGGATTCGCTTACTTACTTCTCCTTTTGTATTAA

>Glyma.01g036900.2 sequence-type=CDS polypeptide=Glyma.01g036900.2.p locus=Glyma.01g036900 id=Glyma.01g036900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAAATCTTCTTCACATCTTTCTGCAATATTCCTATTGTTCTTTCTCCTTACTGCCCTATCCCCTTCGGATGGAGTTTCATTCTCTTCATTCCTAAAGCAATTAAAACAGAAGCTGGAGAAGAGTCCCACCCTAAAAGATTTCCTGAAACCCACCACTATAGGGGATATTTATTATACGTTGAATTTCACAGAAATCTTCTCTTCCGAAGAGAGAAGCGCACCACCGGTGTCTCTCATCAAAGATTACTTATCAAACTACGGCTACATTGAATCCTCTGGGCCATTGAGCAATTCGATGGACCAAGAAACAATAATATCAGCCATTAAGACCTACCAGCAATATTTCAGTTTGCAACCCACCGGCAAACTAAACAACGAGACTCTTCAGCAAATGTCGTTCCTACGATGTGGCGTCCCCGACATTAACATTGACTACAACTTCACCGACGACAACATGTCATATCCGAAAGCCGGTCACCGGTGGTTCCCCCACACAAACCTCACATACGGTTTTCTTCCTGAAAACCAAATCCCAGCCAACGCCGACATCCAAGTAGGGTTCTACAACTTCACTTACTTAGGAATTGATATCGAGGTGTATGGTGGCAGCCTTATATTTTTGCAACCCGATTCTACCAAGAAAGGGGTTATACTTCTCGACGGTACCAATAAGTTGTGGGCTCTTCCCAGTGAAAACGGTAGGTTGTCGTGGGAGGAAGGAGTTTTGGACTTGGAGAGTGCGGCAATGCACGAGATAGGGCATTTACTAGGGCTTGACCACTCTAACAAAGAGGACTCTGTTATGTACCCTTGCATATTGCCTTCACACCAACGAAAGGTGCAGCTCTCGAAATCTGATAAGACCAACGTTCAGCATCAGTTTGCTAACGTAGAGGACTCTGCAGGCCACGTAGGGCGTTTGGGAGTGAGTTTAATTACCACTTTGTCTCTTGGATTCGCTTACTTACTTCTCCTTTTGTATTAA
Predicted protein sequences of Glyma.01g036900
>Glyma.01g036900.1.p sequence-type=predicted peptide transcript=Glyma.01g036900.1 locus=Glyma.01g036900 id=Glyma.01g036900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMKSSSHLSAIFLLFFLLTALSPSDGVSFSSFLKQLKQKLEKSPTLKDFLKPTTIGDIYYTLNFTEIFSSEERSAPPVSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQQYFSLQPTGKLNNETLQQMSFLRCGVPDINIDYNFTDDNMSYPKAGHRWFPHTNLTYGFLPENQIPANMTKVFRDSFARWAQASGVLNLTETTYDNADIQVGFYNFTYLGIDIEVYGGSLIFLQPDSTKKGVILLDGTNKLWALPSENGRLSWEEGVLDLESAAMHEIGHLLGLDHSNKEDSVMYPCILPSHQRKVQLSKSDKTNVQHQFANVEDSAGHVGRLGVSLITTLSLGFAYLLLLLY*

>Glyma.01g036900.2.p sequence-type=predicted peptide transcript=Glyma.01g036900.2 locus=Glyma.01g036900 id=Glyma.01g036900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMKSSSHLSAIFLLFFLLTALSPSDGVSFSSFLKQLKQKLEKSPTLKDFLKPTTIGDIYYTLNFTEIFSSEERSAPPVSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQQYFSLQPTGKLNNETLQQMSFLRCGVPDINIDYNFTDDNMSYPKAGHRWFPHTNLTYGFLPENQIPANADIQVGFYNFTYLGIDIEVYGGSLIFLQPDSTKKGVILLDGTNKLWALPSENGRLSWEEGVLDLESAAMHEIGHLLGLDHSNKEDSVMYPCILPSHQRKVQLSKSDKTNVQHQFANVEDSAGHVGRLGVSLITTLSLGFAYLLLLLY*






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