Glyma.01g029300

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Report for Sequence Feature Glyma.01g029300

Feature Type:	gene_model
Chromosome:	Gm01
Start:	3107239
stop:	3109811
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.01g029300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G23420.1	AT	Plant-specific transcription factor YABBY family protein	JGI	N/A	IEA
GO:0007275	GO-bp	multicellular organism development	EnsemblGenomes	N/A	IEA
KOG0381	KOG	HMG box-containing protein	JGI	N/A	IEA
PF04690	PFAM	YABBY protein	JGI	N/A	IEA

Expression Patterns of Glyma.01g029300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g029300 not represented in the dataset	Glyma.01g029300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.01g029300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma01g03580	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.01g029300

Limit To All Plant Sequences

>Glyma.01g029300.2 sequence-type=transcript locus=Glyma.01g029300 ID=Glyma.01g029300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGATTGATTATGAGTGTCCATCTTCAACTATAAATGCTTCCTTGTGTCAAAAGAACTACAATtttatctctctatctcttctttctcttcctctatcacatacacactctctcactTACAAGTTACAAATTCAGACAGATATGTCAACACTGAACCATCTTTTTGATCTTCCAGAACAGATATGTTATGTAGAATGTGGATTCTGTGCCACCATTTTAATGGTAAGTGTCCCAAGCAGCAGTTTGTCAATGGTGGTGACAGTAAAATGCGGACACTGCACAAGCGTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCATCTCTTAGCCATCTTGAGCCAAAAGAAAGTAGTTCAGAACAAGATGCTAACAAGACTTTGAAGAGACATAATGCATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGCCATTCCAATGAGTAATGTTGTCAATAAACCCCCAGAGAAGAGACAGAGAACACCATCAGCTTATAACTGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAGAACCCTGACATGGCCCACAGGGAAGCTTTTAGTACAGCAGCAAAAAACtgtgaggtgaagtcccacatCGGATAAAAGTGGAAAGGTTGAGCACCATACAAGTGAGGAGAAGACCCATAAACCTGAACCTTAAGGTTTTGGGTTAGAGTGTGGTGTCAGGTCTCCTTATGTGATAACTCGTGCTCAATTGGGCCAATTTCCCCCCAACTCAGTGCAAAGAAGATGAAGAGAGCTGTAGCAGCCAGACAGATCAACATGTGGATCTTGACTCCCAAGTGGACCCTAATGCTGTGGTCAATGAAGAAGAAGGTCAAGGTTTACGTGGAAGAAAGGTCCCAAAGAATTCCATATTGGAAAGGACACCGTTTGAATGAAGAAAGTTCAGCTTATGTGACATAATTAACAAGAACGTTATTTTTTGTAACATTAAGGTTGCCACTAAATCCTTTTCCTAATGAAGAAAATATGCTCTTGGTAATGAAAACGAATTAAGTAGGCTGAGAGCTGACATTTTGAGACTTTAGGAAGTGCTTAAATTGATAGTTTTATCTGACACCTTTCTGTTCCAGTCCACCAGTTCTATTAATTAGTCTTCTTGACCACAAAGGGTTTTTTTTTTTTGGCTCACGTAAATGTTTATTTGTTGAAGTGTTGCTTGATATTAATTCAATAATTCTCAGACTCTCTGCATGTTATTAAGGGCTGTAACAGATAATGGCTACAGATTTTCGTGTTAGA

Coding sequences of Glyma.01g029300

Limit To All Plant Sequences

>Glyma.01g029300.1 sequence-type=CDS polypeptide=Glyma.01g029300.1.p locus=Glyma.01g029300 ID=Glyma.01g029300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGATTGATTATGAGTGTCCATCTTCAACTATAAATGCTTCCTTGTGTCAAAAGAACTACAATTTTATCTCTCTATCTCTTCTTTCTCTTCCTCTATCACATACACACTCTCTCACTTACAAGTTACAAATTCAGACAGATATGTCAACACTGAACCATCTTTTTGATCTTCCAGAACAGATATGTTATGTAGAATGTGGATTCTGTGCCACCATTTTAATGGTAAGTGTCCCAAGCAGCAGTTTGTCAATGGTGGTGACAGTAAAATGCGGACACTGCACAAGCGTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCATCTCTTAGCCATCTTGAGCCAAAAGAAAGTAGTTCAGAACAAGATGCTAACAAGACTTTGAAGAGACATAATGCATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGCCATTCCAATGAGTAATGTTGTCAATAAACCCCCAGAGAAGAGACAGAGAACACCATCAGCTTATAACTGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAGAACCCTGACATGGCCCACAGGGAAGCTTTTAGTACAGCAGCAAAAAACTGGGCCAATTTCCCCCCAACTCAGTGCAAAGAAGATGAAGAGAGCTGTAGCAGCCAGACAGATCAACATGTGGATCTTGACTCCCAAGTGGACCCTAATGCTGTGGTCAATGAAGAAGAAGGTCAAGGTTTACGTGGAAGAAAGGTCCCAAAGAATTCCATATTGGAAAGGACACCGTTTGAATGA

>Glyma.01g029300.2 sequence-type=CDS polypeptide=Glyma.01g029300.2.p locus=Glyma.01g029300 ID=Glyma.01g029300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGATTGATTATGAGTGTCCATCTTCAACTATAAATGCTTCCTTGTGTCAAAAGAACTACAATTTTATCTCTCTATCTCTTCTTTCTCTTCCTCTATCACATACACACTCTCTCACTTACAAGTTACAAATTCAGACAGATATGTCAACACTGAACCATCTTTTTGATCTTCCAGAACAGATATGTTATGTAGAATGTGGATTCTGTGCCACCATTTTAATGGTAAGTGTCCCAAGCAGCAGTTTGTCAATGGTGGTGACAGTAAAATGCGGACACTGCACAAGCGTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCATCTCTTAGCCATCTTGAGCCAAAAGAAAGTAGTTCAGAACAAGATGCTAACAAGACTTTGAAGAGACATAATGCATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGCCATTCCAATGAGTAATGTTGTCAATAAACCCCCAGAGAAGAGACAGAGAACACCATCAGCTTATAACTGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAGAACCCTGACATGGCCCACAGGGAAGCTTTTAGTACAGCAGCAAAAAACTGTGAGGTGAAGTCCCACATCGGATAA

Predicted protein sequences of Glyma.01g029300

Limit To All Plant Sequences

>Glyma.01g029300.1.p sequence-type=predicted peptide transcript=Glyma.01g029300.1 locus=Glyma.01g029300 ID=Glyma.01g029300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMIDYECPSSTINASLCQKNYNFISLSLLSLPLSHTHSLTYKLQIQTDMSTLNHLFDLPEQICYVECGFCATILMVSVPSSSLSMVVTVKCGHCTSVLSVNMMKASFVPFHLLASLSHLEPKESSSEQDANKTLKRHNASMMTYSDCEEEDAIPMSNVVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHREAFSTAAKNWANFPPTQCKEDEESCSSQTDQHVDLDSQVDPNAVVNEEEGQGLRGRKVPKNSILERTPFE*

>Glyma.01g029300.2.p sequence-type=predicted peptide transcript=Glyma.01g029300.2 locus=Glyma.01g029300 ID=Glyma.01g029300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMIDYECPSSTINASLCQKNYNFISLSLLSLPLSHTHSLTYKLQIQTDMSTLNHLFDLPEQICYVECGFCATILMVSVPSSSLSMVVTVKCGHCTSVLSVNMMKASFVPFHLLASLSHLEPKESSSEQDANKTLKRHNASMMTYSDCEEEDAIPMSNVVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHREAFSTAAKNCEVKSHIG*

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