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Report for Sequence Feature Glyma.01g027900

Feature Type:gene_model
Chromosome:Gm01
Start:2914925
stop:2919046
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g027900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G26610.1AT JGI N/AIEA
3.2.1.15EC endo-polygalacturonase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004650GO-mf polygalacturonase activity JGI N/AIEA
K01213KEGG Pentose and glucuronate interconversions JGI N/AIEA
PTHR31375PantherFam FAMILY NOT NAMED JGI N/AIEA
PF00295Pfam Glycosyl hydrolases family 28 JGI N/AIEA

Gene model name correspondences to Glyma.01g027900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g03400 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g027900
>Glyma.01g027900.1 sequence-type=CDS polypeptide=Glyma.01g027900.1.p locus=Glyma.01g027900 id=Glyma.01g027900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGAGGAACAGAAGTTTTTCCTTACTCTTTTTCCTGTCCTTGTTGGTGATTATCTTTGTCACCTTCTCTATAGTTTCTGTGGAAGCAAGGAAGACAAACATCAAGAAAAAACTTCACAAACGTCACAAAGGTGGTCACACTCAAGGGTCACATTCTCCATGCCCAGTGCCAACCCCTCAAGGGAGCACCTTTGACGTTTTGTCTTTTGGCGCCAAGGGAAATGGAGTTTCTGATGATTCAGAGGCATTTCTAGCTGCATGGAATGGTGCATGTAAAGTTGCTGGTGCTACAGTTAAAATTCCAGCACAACTCAAGTTCCTCATCAAACCTGTTACTTTACAAGGCCCTTGTATATCTGACCTTACTCTTCAGATAGATGGAACTCTGTTGGCACCTCCTGAAGCATCTACCTGGCCAAAATCCAGTTTGTTTCAGTGGATAAATTTCAAGTGGGTGCGGAACTTCACCATCAAAGGTTCTGGCACTGTTGATGGCCAAGGCTATAACTGGTGGAGCTCCTCAGAATTTTATGACATACAGAAGAGCTACTCCAAACATATTCCTGGCATGAAACCAACCGCTATAAGATTCTACTCCAGCAACTTTGTAACAGTTCGTGATATCAGAATCATAAACAGTCCTCTGTGCCATCTAAAATTTGACAACTCAAAGGGGATTAAAGTTAACAACATTACAATATCCTCCCCGGAGAATAGCCCCAACACTGATGGCATTCACTTACAAAACACACAGGACGTAGAAATTCAACGTTCTATCATTTCAACAGGAGATGACTGTGTATCCATCCAAACCGGTTGCTCTAATATTCATGTCCACCACATTAATTGTGGCCCTGGACATGGTATAAGTTTGGGAGGATTAGGAAAAGACAAGAGTGCGGCATGTGTGTCTGACATCACTGTTGAGGATATATCTATGAAAAACACTCTATATGGAGCAAGGATCAAAACATGGCAGGGAGGCATTGGTATGGTTAAAAATGTGACATTTTCCAGAATTCAAGTCTATGATGTTATGTACCCAATAATGATAGACCAATACTATTGTGACAAGCAAATCTGCAAGAACCATACAAGCACTGTGGTGATTTCTGGGGTTAAGTTTGATCAAATACATGGAACTTATGGTATGCAGCCTGTGCATCTAGCTTGCAGCAATTCCATACCATGCACAGATGTTGATTTAACTGATATTCAACTGAGTCCCTCCCCTAAATATAGAGGTTTGCAACAAGCTGTGTGCTGGAACTCTTATGGAAAATCACAAGGGCCCTTTCTACCTTCAAGCATTGATTATTGCTTGAGAAGTGGTGGTGGATTAATCAAGAGGATAGCAAGGTCACATGATAAAGTGTGCTACTAA

>Glyma.01g027900.2 sequence-type=CDS polypeptide=Glyma.01g027900.2.p locus=Glyma.01g027900 id=Glyma.01g027900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGAGGAACAGAAGTTTTTCCTTACTCTTTTTCCTGTCCTTGTTGGTGATTATCTTTGTCACCTTCTCTATAGTTTCTGTGGAAGCAAGGAAGACAAACATCAAGAAAAAACTTCACAAACGTCACAAAGGTGGTCACACTCAAGGGTCACATTCTCCATGCCCAGTGCCAACCCCTCAAGGGAGCACCTTTGACGTTTTGTCTTTTGGCGCCAAGGGAAATGGAGTTTCTGATGATTCAGAGGCATTTCTAGCTGCATGGAATGGTGCATGTAAAGTTGCTGGTGCTACAGTTAAAATTCCAGCACAACTCAAGTTCCTCATCAAACCTGTTACTTTACAAGGCCCTTGTATATCTGACCTTACTCTTCAGATAGATGGAACTCTGTTGGCACCTCCTGAAGCATCTACCTGGCCAAAATCCAGTTTGTTTCAGTGGATAAATTTCAAGTGGGTGCGGAACTTCACCATCAAAGGTTCTGGCACTGTTGATGGCCAAGGCTATAACTGGTGGAGCTCCTCAGAATTTTATGACATACAGAAGAGCTACTCCAAACATATTCCTGGCATGAAACCAACCGCTATAAGATTCTACTCCAGCAACTTTGTAACAGTTCGTGATATCAGAATCATAAACAGTCCTCTGTGCCATCTAAAATTTGACAACTCAAAGGGGATTAAAGTTAACAACATTACAATATCCTCCCCGGAGAATAGCCCCAACACTGATGGCATTCACTTACAAAACACACAGGACGTAGAAATTCAACGTTCTATCATTTCAACAGGAGATGACTGTGTATCCATCCAAACCGGTTGCTCTAATATTCATGTCCACCACATTAATTGTGGCCCTGGACATGGTATAAGTTTGGGAGGATTAGGAAAAGACAAGAGTGCGGCATGTGTGTCTGACATCACTGTTGAGGATATATCTATGAAAAACACTCTATATGGAGCAAGGATCAAAACATGGCAGGGAGGCATTGGTATGGTTAAAAATGTGACATTTTCCAGAATTCAAGTCTATGATGTTATGTACCCAATAATGATAGACCAATACTATTGTGACAAGCAAATCTGCAAGAACCATACAAGCACTGTGGTGATTTCTGGGGTTAAGTTTGATCAAATACATGGAACTTATGGTATGCAGCCTGTGCATCTAGCTTGCAGCAATTCCATACCATGCACAGATGTTGATTTAACTGATATTCAACTGAGTCCCTCCCCTAAATATAGAGGTTTGCAACAAGCTGTGTGCTGGAACTCTTATGGAAAATCACAAGGGCCCTTTCTACCTTCAAGCATTGATTATTGCTTGAGAAGTGGTGGTGGATTAATCAAGAGGATAGCAAGGTCACATGATAAAGTGTGCTACTAA
Predicted protein sequences of Glyma.01g027900
>Glyma.01g027900.1.p sequence-type=predicted peptide transcript=Glyma.01g027900.1 locus=Glyma.01g027900 id=Glyma.01g027900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKRNRSFSLLFFLSLLVIIFVTFSIVSVEARKTNIKKKLHKRHKGGHTQGSHSPCPVPTPQGSTFDVLSFGAKGNGVSDDSEAFLAAWNGACKVAGATVKIPAQLKFLIKPVTLQGPCISDLTLQIDGTLLAPPEASTWPKSSLFQWINFKWVRNFTIKGSGTVDGQGYNWWSSSEFYDIQKSYSKHIPGMKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPNTDGIHLQNTQDVEIQRSIISTGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSAACVSDITVEDISMKNTLYGARIKTWQGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKQICKNHTSTVVISGVKFDQIHGTYGMQPVHLACSNSIPCTDVDLTDIQLSPSPKYRGLQQAVCWNSYGKSQGPFLPSSIDYCLRSGGGLIKRIARSHDKVCY*

>Glyma.01g027900.2.p sequence-type=predicted peptide transcript=Glyma.01g027900.2 locus=Glyma.01g027900 id=Glyma.01g027900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKRNRSFSLLFFLSLLVIIFVTFSIVSVEARKTNIKKKLHKRHKGGHTQGSHSPCPVPTPQGSTFDVLSFGAKGNGVSDDSEAFLAAWNGACKVAGATVKIPAQLKFLIKPVTLQGPCISDLTLQIDGTLLAPPEASTWPKSSLFQWINFKWVRNFTIKGSGTVDGQGYNWWSSSEFYDIQKSYSKHIPGMKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPNTDGIHLQNTQDVEIQRSIISTGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSAACVSDITVEDISMKNTLYGARIKTWQGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKQICKNHTSTVVISGVKFDQIHGTYGMQPVHLACSNSIPCTDVDLTDIQLSPSPKYRGLQQAVCWNSYGKSQGPFLPSSIDYCLRSGGGLIKRIARSHDKVCY*






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