Report for Sequence Feature Glyma.01g017400
| Feature Type: | gene_model |
| Chromosome: | Gm01 |
| Start: | 1656041 |
| stop: | 1659468 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
|
Annotations for Glyma.01g017400
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT2G35410.1 | AT |
|
JGI | N/A | IEA |
| GO:0003676 | GO-mf |
nucleic acid binding |
JGI | N/A | IEA |
| KOG0106 |
KOG |
Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) |
JGI | N/A | IEA |
| KOG0110 |
KOG |
RNA-binding protein (RRM superfamily) |
JGI | N/A | IEA |
| KOG0131 |
KOG |
Splicing factor 3b, subunit 4 |
JGI | N/A | IEA |
| KOG0144 |
KOG |
RNA-binding protein CUGBP1/BRUNO (RRM superfamily) |
JGI | N/A | IEA |
| KOG0146 |
KOG |
RNA-binding protein ETR-3 (RRM superfamily) |
JGI | N/A | IEA |
| PTHR24012 | PantherFam |
RNA BINDING PROTEIN |
JGI | N/A | IEA |
| PF00076 | Pfam |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.01g017400 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma01g02150 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.01g017400
>Glyma.01g017400.1 sequence-type=CDS polypeptide=Glyma.01g017400.1.p locus=Glyma.01g017400 id=Glyma.01g017400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGCTACTTTAGAATCAGCCTTCATCCTCTTCGCACCTCAACGGTTCTCCAATAGCCATCGTTTCTCTGCAAAAGCACCGATCTCCATCAAGCTCCATGCTTCCACCTCCCTTTTCTTCTCTTCCAAGTCCTCCTTCAAAACGGGAAGACTCTGCTTCCAGTTATGCTCCACTTTGCAAGAGGTAGCAGCAACAGAAGAAACACCTGAGCTAACGCAACCAACAGACAACGTAAAGAAGCTGTACGTGGTTAACTTGTCTTGGTCTCTGACGGCGGCAGACATCAATGACCTCTTTGCCCAAAGCGGAACCGTAACCGACGTCGAGATAATAAAGAGCAAAGACGGGAGGAGCAAGGGCTATGCCTTCGTTACTATGGCTTCCGGGGAAGAGGCTCAGGCTGCTGTTGATAAATTTGACTCTTATGAATTATCAGGACGGATAATAAGGGTAGAACTTGCAAAGAGATTCAAAAAACCTCCTTCTCCTCCACCTCCTCCAGGTCCCCGTCCTGGAGAGACACGTCATGTAATTTATGCATCCAACCTTGCATGGAAAGCAAGATCTACCCATCTCAGACAACTCTTCGCTGAGAATTTCAAAACACCATCTTCAGCCAGGGTTGTCTTTGACAGCCCTTCTGGACGATCTGCTGGGTACGGATTTGTTTCTTTTCTTACCAAGGAGGATGCAGAGGCTGCCATTTCTACTGTGGATGGGAAGGAGTTAATGGGACGACCGCTTCGCCTAAAATTCAGTGAAAAGAAAGATAAAGCTGGAAGGGAAAAAGATGAAGACCAAGATAAAGATGCTGGAAGTGAAGAAGATGAAGACGAAGGTTCTGATGCTCGACCGGAAGAATCATAA
Predicted protein sequences of Glyma.01g017400
>Glyma.01g017400.1.p sequence-type=predicted peptide transcript=Glyma.01g017400.1 locus=Glyma.01g017400 id=Glyma.01g017400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAATLESAFILFAPQRFSNSHRFSAKAPISIKLHASTSLFFSSKSSFKTGRLCFQLCSTLQEVAATEETPELTQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRFKKPPSPPPPPGPRPGETRHVIYASNLAWKARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAISTVDGKELMGRPLRLKFSEKKDKAGREKDEDQDKDAGSEEDEDEGSDARPEES*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
