Glyma.01g014500

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Report for Sequence Feature Glyma.01g014500

Feature Type:	gene_model
Chromosome:	Gm01
Start:	1394486
stop:	1397925
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Expression Patterns of Glyma.01g014500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g014500 not represented in the dataset	Glyma.01g014500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.01g014500

Paralog	Evidence	Comments
Glyma.09g207600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01g014500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma01g01840	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.01g014500

Limit To All Plant Sequences

>Glyma.01g014500.2 sequence-type=transcript locus=Glyma.01g014500 ID=Glyma.01g014500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TAAATTTAAAATGACAAGAAACACTATATACTAATTTCATTGAAGTCTGAAATTATGCGTGCAATTGTTTACTTAACTTAGCGGTGGCgttgagagttgagagtgaggggtttaggtttaaagttgaAGAAGGAGCGAGCATGGGGAAGGAAGGAGATCTATGGGACGATTCATCTCTCATCAATGCCTTCGACCAAGCTATTTCTACTTTCAACCGGCAAACACAAAGGCGCCGCCACGGCTCGAGAGGCGGACACAATCATCGGAGAAAATGGCTCCAATGTTGACACTACAAGGGATGCTGATACGAATATTCCAGCTACTGATGTGCCTGATTCAGGTGAAACTGGTAATTTGTCAAAGTTGGAAGAAAATCATCAAACAGAGTCACAGGTGGATCAACCTTGTCTGGATTCAACAAGTGGCCAAGACATCCAGAATGCGCAGAACGGTTATGCATATGCACAAGGTGGAGATGATTATAATCAGTTAGTTGTGCAATACTATGAACTTGAGGAGAAAAGGGCGAAGATTTTGGAGCACCTTAATCAATATGGTGGTTGGAATTACCAAAATGTGGCTGCTGATTCTAGCTCTGGTGTACCATATTCTAATTTTCAAGATTATTCAATGGCTGCATACCAAGTTTCTGATCCAAATGCCGTCTGTACATGTTGCCCATGTTACAGTCAATGTCTGCCAGCTCCATGCACGTCAGTTCCTGGTTGTTCTTTGGGTGGATCATCTGTTGGCAAGCAGTGTAACGATCTTTCTGTGGAAAAGGATCATAAAATGTCATTTCCTTGTGAAGATGGTGAAATCCATAAAATGGCAATGGGAGCTGCAGAGAAGGCACTGTCTACTATCAGAACAACCATATCCGGTGATTTTAATGTAAATGAAGGGAAAGAGAGAAACAATTCTGAACCTGAAAAAATTAATGGCTCAGAAACAGATCTTGCTGCTGTTTTGAATGCTTGGTATTCTGCTGGCTTCTATACTGGAAAGTATCTTGCTGAACAATCCATTCAAAACGGAAGACAGAATTGAACTCTTACATCTTTATGTGGAGTCAAAAGGGTTCTCATACAACTATACAAGCCCTTGTGATTATACTCAACAGTTGGGCAACTGATCTACTCTTCACATCTTTGGGAAATCAAAAGAACTTTGGTATATTCTGATCTGATTGGATAGGCTGGCTCATCATAATTTTTTTATGCCCCGGTGCTAGTTTTGTTAGCAAGATTTTACTGGACATATTTAGGGAATGTTTTCGCTCTCTGCTGCAGACATGAATATGTTGCCCCATTTGGTGTTGAATGCCGAACTATAAAATGCATAAATCATTTTGTTTTGTTGTTTATGTCTGTATTTAATAGTTGGCACTAGCGAGAGAGGAGTGATGGCATCACCCGTTGCTCTTTTCCTTGGTTTAACATTAACATTACAAGGGGTGTTGAAATGTTGTTGTTAGTGGTTTATATGCGGACGTATAGAAGCGCAATCATGCTTGCGTACTTGCGTCAATGCCAAAGTTGAAGATCACCCAAGGTCTAGTTTTGTACGTGCTATAGACTAATttgtttaaacttatttgttgaaataaatgtttattttaataaaataagcatttttCTGTGTT

>Glyma.01g014500.3 sequence-type=transcript locus=Glyma.01g014500 ID=Glyma.01g014500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TAAATTTAAAATGACAAGAAACACTATATACTAATTTCATTGAAGTCTGAAATTATGCGTGCAATTGTTTACTTAACTTAGCGGTGGCgttgagagttgagagtgaggggtttaggtttaaagttgaAGAAGGAGCGAGCATGGGGAAGGAAGGAGATCTATGGGACGATTCATCTCTCATCAATGCCTTCGACCAAGCTATTTCTACTTTCAACGTTCTCTTCATAACCCTATTTTTCACTCTTCAAATTCGGTCTTAATCTGAGAATTTCGTTATTAACTAATTTACAGAAAATGCATAGCAGCGGCAAACACAAAGGCGCCGCCACGGCTCGAGAGGCGGACACAATCATCGGAGAAAATGGCTCCAATGTTGACACTACAAGGGATGCTGATACGAATATTCCAGCTACTGATGTGCCTGATTCAGGTGAAACTGGTAATTTGTCAAAGTTGGAAGAAAATCATCAAACAGAGTCACAGGTGGATCAACCTTGTCTGGATTCAACAAGTGGCCAAGACATCCAGAATGCGCAGAACGGTTATGCATATGCACAAGGTGGAGATGATTATAATCAGTTAGTTGTGCAATACTATGAACTTGAGGAGAAAAGGGCGAAGATTTTGGAGCACCTTAATCAATATGGTGGTTGGAATTACCAAAATGTGGCTGCTGATTCTAGCTCTGGTGTACCATATTCTAATTTTCAAGATTATTCAATGGCTGCATACCAAGTTTCTGATCCAAATGCCGTCTGTACATGTTGCCCATGTTACAGTCAATGTCTGCCAGCTCCATGCACGTCAGTTCCTGGTTGTTCTTTGGGTGGATCATCTGTTGGCAAGCAGTGTAACGATCTTTCTGTGGAAAAGGATCATAAAATGTCATTTCCTTGTGAAGATGGTGAAATCCATAAAATGGCAATGGGAGCTGCAGAGAAGGCACTGTCTACTATCAGAACAACCATATCCGGTGATTTTAATGTAAATGAAGGGAAAGAGAGAAACAATTCTGAACCTGAAAAAATTAATGGCTCAGAAACAGATCTTGCTGCTGTTTTGAATGCTTGGTATTCTGCTGGCTTCTATACTGGAAAGTATCTTGCTGAACAATCCATTCAAAACGGAAGACAGAATTGAACTCTTACATCTTTATGTGGAGTCAAAAGGGTTCTCATACAACTATACAAGCCCTTGTGATTATACTCAACAGTTGGGCAACTGATCTACTCTTCACATCTTTGGGAAATCAAAAGAACTTTGGTATATTCTGATCTGATTGGATAGGCTGGCTCATCATAATTTTTTTATGCCCCGGTGCTAGTTTTGTTAGCAAGATTTTACTGGACATATTTAGGGAATGTTTTCGCTCTCTGCTGCAGACATGAATATGTTGCCCCATTTGGTGTTGAATGCCGAACTATAAAATGCATAAATCATTTTGTTTTGTTGTTTATGTCTGTATTTAATAGTTGGCACTAGCGAGAGAGGAGTGATGGCATCACCCGTTGCTCTTTTCCTTGGTTTAACATTAACATTACAAGGGGTGTTGAAATGTTGTTGTTAGTGGTTTATATGCGGACGTATAGAAGCGCAATCATGCTTGCGTACTTGCGTCAATGCCAAAGTTGAAGATCACCCAAGGTCTAGTTTTGTACGTGCTATAGACTAATttgtttaaacttatttgttgaaataaatgtttattttaataaaataagcatttttCTGTGTT

Coding sequences of Glyma.01g014500

Limit To All Plant Sequences

>Glyma.01g014500.1 sequence-type=CDS polypeptide=Glyma.01g014500.1.p locus=Glyma.01g014500 ID=Glyma.01g014500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGAAGGAAGGAGATCTATGGGACGATTCATCTCTCATCAATGCCTTCGACCAAGCTATTTCTACTTTCAACAAAATGCATAGCAGCGGCAAACACAAAGGCGCCGCCACGGCTCGAGAGGCGGACACAATCATCGGAGAAAATGGCTCCAATGTTGACACTACAAGGGATGCTGATACGAATATTCCAGCTACTGATGTGCCTGATTCAGGTGAAACTGGTAATTTGTCAAAGTTGGAAGAAAATCATCAAACAGAGTCACAGGTGGATCAACCTTGTCTGGATTCAACAAGTGGCCAAGACATCCAGAATGCGCAGAACGGTTATGCATATGCACAAGGTGGAGATGATTATAATCAGTTAGTTGTGCAATACTATGAACTTGAGGAGAAAAGGGCGAAGATTTTGGAGCACCTTAATCAATATGGTGGTTGGAATTACCAAAATGTGGCTGCTGATTCTAGCTCTGGTGTACCATATTCTAATTTTCAAGATTATTCAATGGCTGCATACCAAGTTTCTGATCCAAATGCCGTCTGTACATGTTGCCCATGTTACAGTCAATGTCTGCCAGCTCCATGCACGTCAGTTCCTGGTTGTTCTTTGGGTGGATCATCTGTTGGCAAGCAGTGTAACGATCTTTCTGTGGAAAAGGATCATAAAATGTCATTTCCTTGTGAAGATGGTGAAATCCATAAAATGGCAATGGGAGCTGCAGAGAAGGCACTGTCTACTATCAGAACAACCATATCCGGTGATTTTAATGTAAATGAAGGGAAAGAGAGAAACAATTCTGAACCTGAAAAAATTAATGGCTCAGAAACAGATCTTGCTGCTGTTTTGAATGCTTGGTATTCTGCTGGCTTCTATACTGGAAAGTATCTTGCTGAACAATCCATTCAAAACGGAAGACAGAATTGA

>Glyma.01g014500.2 sequence-type=CDS polypeptide=Glyma.01g014500.2.p locus=Glyma.01g014500 ID=Glyma.01g014500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTTCGACCAAGCTATTTCTACTTTCAACCGGCAAACACAAAGGCGCCGCCACGGCTCGAGAGGCGGACACAATCATCGGAGAAAATGGCTCCAATGTTGACACTACAAGGGATGCTGATACGAATATTCCAGCTACTGATGTGCCTGATTCAGGTGAAACTGGTAATTTGTCAAAGTTGGAAGAAAATCATCAAACAGAGTCACAGGTGGATCAACCTTGTCTGGATTCAACAAGTGGCCAAGACATCCAGAATGCGCAGAACGGTTATGCATATGCACAAGGTGGAGATGATTATAATCAGTTAGTTGTGCAATACTATGAACTTGAGGAGAAAAGGGCGAAGATTTTGGAGCACCTTAATCAATATGGTGGTTGGAATTACCAAAATGTGGCTGCTGATTCTAGCTCTGGTGTACCATATTCTAATTTTCAAGATTATTCAATGGCTGCATACCAAGTTTCTGATCCAAATGCCGTCTGTACATGTTGCCCATGTTACAGTCAATGTCTGCCAGCTCCATGCACGTCAGTTCCTGGTTGTTCTTTGGGTGGATCATCTGTTGGCAAGCAGTGTAACGATCTTTCTGTGGAAAAGGATCATAAAATGTCATTTCCTTGTGAAGATGGTGAAATCCATAAAATGGCAATGGGAGCTGCAGAGAAGGCACTGTCTACTATCAGAACAACCATATCCGGTGATTTTAATGTAAATGAAGGGAAAGAGAGAAACAATTCTGAACCTGAAAAAATTAATGGCTCAGAAACAGATCTTGCTGCTGTTTTGAATGCTTGGTATTCTGCTGGCTTCTATACTGGAAAGTATCTTGCTGAACAATCCATTCAAAACGGAAGACAGAATTGA

>Glyma.01g014500.3 sequence-type=CDS polypeptide=Glyma.01g014500.3.p locus=Glyma.01g014500 ID=Glyma.01g014500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCATAGCAGCGGCAAACACAAAGGCGCCGCCACGGCTCGAGAGGCGGACACAATCATCGGAGAAAATGGCTCCAATGTTGACACTACAAGGGATGCTGATACGAATATTCCAGCTACTGATGTGCCTGATTCAGGTGAAACTGGTAATTTGTCAAAGTTGGAAGAAAATCATCAAACAGAGTCACAGGTGGATCAACCTTGTCTGGATTCAACAAGTGGCCAAGACATCCAGAATGCGCAGAACGGTTATGCATATGCACAAGGTGGAGATGATTATAATCAGTTAGTTGTGCAATACTATGAACTTGAGGAGAAAAGGGCGAAGATTTTGGAGCACCTTAATCAATATGGTGGTTGGAATTACCAAAATGTGGCTGCTGATTCTAGCTCTGGTGTACCATATTCTAATTTTCAAGATTATTCAATGGCTGCATACCAAGTTTCTGATCCAAATGCCGTCTGTACATGTTGCCCATGTTACAGTCAATGTCTGCCAGCTCCATGCACGTCAGTTCCTGGTTGTTCTTTGGGTGGATCATCTGTTGGCAAGCAGTGTAACGATCTTTCTGTGGAAAAGGATCATAAAATGTCATTTCCTTGTGAAGATGGTGAAATCCATAAAATGGCAATGGGAGCTGCAGAGAAGGCACTGTCTACTATCAGAACAACCATATCCGGTGATTTTAATGTAAATGAAGGGAAAGAGAGAAACAATTCTGAACCTGAAAAAATTAATGGCTCAGAAACAGATCTTGCTGCTGTTTTGAATGCTTGGTATTCTGCTGGCTTCTATACTGGAAAGTATCTTGCTGAACAATCCATTCAAAACGGAAGACAGAATTGA

Predicted protein sequences of Glyma.01g014500

Limit To All Plant Sequences

>Glyma.01g014500.1.p sequence-type=predicted peptide transcript=Glyma.01g014500.1 locus=Glyma.01g014500 ID=Glyma.01g014500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGKEGDLWDDSSLINAFDQAISTFNKMHSSGKHKGAATAREADTIIGENGSNVDTTRDADTNIPATDVPDSGETGNLSKLEENHQTESQVDQPCLDSTSGQDIQNAQNGYAYAQGGDDYNQLVVQYYELEEKRAKILEHLNQYGGWNYQNVAADSSSGVPYSNFQDYSMAAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVGKQCNDLSVEKDHKMSFPCEDGEIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSEPEKINGSETDLAAVLNAWYSAGFYTGKYLAEQSIQNGRQN*

>Glyma.01g014500.2.p sequence-type=predicted peptide transcript=Glyma.01g014500.2 locus=Glyma.01g014500 ID=Glyma.01g014500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPSTKLFLLSTGKHKGAATAREADTIIGENGSNVDTTRDADTNIPATDVPDSGETGNLSKLEENHQTESQVDQPCLDSTSGQDIQNAQNGYAYAQGGDDYNQLVVQYYELEEKRAKILEHLNQYGGWNYQNVAADSSSGVPYSNFQDYSMAAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVGKQCNDLSVEKDHKMSFPCEDGEIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSEPEKINGSETDLAAVLNAWYSAGFYTGKYLAEQSIQNGRQN*

>Glyma.01g014500.3.p sequence-type=predicted peptide transcript=Glyma.01g014500.3 locus=Glyma.01g014500 ID=Glyma.01g014500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MHSSGKHKGAATAREADTIIGENGSNVDTTRDADTNIPATDVPDSGETGNLSKLEENHQTESQVDQPCLDSTSGQDIQNAQNGYAYAQGGDDYNQLVVQYYELEEKRAKILEHLNQYGGWNYQNVAADSSSGVPYSNFQDYSMAAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVGKQCNDLSVEKDHKMSFPCEDGEIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSEPEKINGSETDLAAVLNAWYSAGFYTGKYLAEQSIQNGRQN*

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