SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g013200

Feature Type:gene_model
Chromosome:Gm01
Start:1247847
stop:1252574
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g013200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G14075.2AT JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
KOG2088 KOG Predicted lipase/calmodulin-binding heat-shock protein JGI N/AIEA
PTHR21493PantherFam CGI-141-RELATED/LIPASE CONTAINING PROTEIN JGI N/AIEA
PF01764Pfam Lipase (class 3) JGI N/AIEA

Gene model name correspondences to Glyma.01g013200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g01690 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g013200
>Glyma.01g013200.3 sequence-type=CDS polypeptide=Glyma.01g013200.3.p locus=Glyma.01g013200 id=Glyma.01g013200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATAACGTCGATAGTGGTTAGGAAGGCCGCCGGAAAGCTTGAAAAGAGGCCAGCCGAGGCGCCCAAAACATTGATGGACACAGTGCTTACGTTAGCAGAAGCCATAAGGTTCGGTTACGCCGAGACACTGGGCAAATGGCACCTCTTTGATTTGCCAAGAGCTATCCTTTACTCTATCATGGACAAGCGTAAGAAAACAGTTACAATCGAATGTAGCGAAAGAAGTGATTGTGTGCAACTCACAGACCCCGAAATATTAAAGGAGTTGTATGAGCTGAAAAGATGCTTGACACTGACCATGCTTTTCAGCAAAAAACGGTTTCGTACGTTTTTATTCGCTGCTCAATTCGCCAAGGACGATGTCCTCCTAAGGAAGAAAAAAGCTCGGATTCTAAAGCCGGCTTTCACAGTTATACGTGATAAAAAATCAAAATGTTTGTTTGTGTTCATCCGAGGAACTCGTAGCATAAAAGACACTCTGACAGATGCAATCGGTGCTCCCGTTTCCTTCAATCATTATATTTGCAGTGATGGTGAGCTGAAGAGGAAAAACGAGGTTGCAGGACATGCACACCGTGGTATGGTTGCTGCAGCTGGTTGGATTAAAAAACACTGCACTCCTATACTACTTGATGCTCTTCGTCGATACCCTGATTTCGAAATCAAGATCGTTGGGCACTCGCTTGGTGGTGGTACTGCTGCACTATTGACATATATGCTCAGAGAAATAAAGCAGTTCTCTTCATGCACTTGTGTCACGTTTGGCCCAGCTGCTTGTATGACATTGGGATTAGCCGAATTCGGGAAGCCCTTTATCACTTCCATTATAAATGGTTTTGATATGGTGCCTACATTGTCAGCTTGTTCTGTTCATGATTTCATTTCCGAGGGTCTGATTAAGCGTAAAAAAATCCTAAATGCTGCTCGTAACGCAGTTGTATCTCGCTTACCATTTGCATCTACTGCGAAAGCCATTGCAGCCCGTGGCTCTCAGGTTGTGATGAAGAACAAGCAAAGAACTCGGTCATTGTTACCCTGGTCCCGACGTAAGAATACTGAGGCATTGGCAAGCTCTAAATCAGAGAACTTGGCTGAAGCTTGTCGATCAATCGAGACAAGTTGCGAATTCGAAGTGGCTGAAGAGACGAGTGATGAGGACGACGGATCTAAATCCTCTAGTGAAGAATCTGATGATGATGAAGAGGAACAAATCTTATCTGCTACTCAGAACATTACTAATCAGAATATTTCTGAGGATGAATTGTTGAATCAAGTCAAGGGGCTTGAACTAGAGACCGAGGATGATATCCCTAACACTCATGCGCAGGAAAAAGAAGCAACCACAACCAAAGACTTTACTACTCTGAATATTTCCGAGGATGATATCCCTAACATTCATGCGCAGGAAAAAGAAGCAGCCACAACCAAAGACATTAATATTCATGCTAAGGAAAAAGAGATCGTTGATCATGTTGTTGATGATGAAGAAAGTGGTGGTTCTGACAACTTGGGTAGACACCCTCTTTATCCTCCGGGAAGGGTCATGCACATTGTTCCCGCACTTTCGTCTGAAAATTCTAAATCAAACCACAATGATCCTGATGAGAAGAAGCAGGTCTTCTTATATAAAACGTCTACAGAGTTGTATGGGAAGCTTAGACTTTCAAGAGGGATGCTACTTGATCATTACACGAGCAATTATCTGAAGATGTTACAGCAATTTATCGATCAACTTGAGAAAGAGAAGTTTCACTATGGTGGATGA
Predicted protein sequences of Glyma.01g013200
>Glyma.01g013200.3.p sequence-type=predicted peptide transcript=Glyma.01g013200.3 locus=Glyma.01g013200 id=Glyma.01g013200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MITSIVVRKAAGKLEKRPAEAPKTLMDTVLTLAEAIRFGYAETLGKWHLFDLPRAILYSIMDKRKKTVTIECSERSDCVQLTDPEILKELYELKRCLTLTMLFSKKRFRTFLFAAQFAKDDVLLRKKKARILKPAFTVIRDKKSKCLFVFIRGTRSIKDTLTDAIGAPVSFNHYICSDGELKRKNEVAGHAHRGMVAAAGWIKKHCTPILLDALRRYPDFEIKIVGHSLGGGTAALLTYMLREIKQFSSCTCVTFGPAACMTLGLAEFGKPFITSIINGFDMVPTLSACSVHDFISEGLIKRKKILNAARNAVVSRLPFASTAKAIAARGSQVVMKNKQRTRSLLPWSRRKNTEALASSKSENLAEACRSIETSCEFEVAEETSDEDDGSKSSSEESDDDEEEQILSATQNITNQNISEDELLNQVKGLELETEDDIPNTHAQEKEATTTKDFTTLNISEDDIPNIHAQEKEAATTKDINIHAKEKEIVDHVVDDEESGGSDNLGRHPLYPPGRVMHIVPALSSENSKSNHNDPDEKKQVFLYKTSTELYGKLRLSRGMLLDHYTSNYLKMLQQFIDQLEKEKFHYGG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo