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Report for Sequence Feature Glyma.01g010400

Feature Type:gene_model
Chromosome:Gm01
Start:1013916
stop:1018579
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g010400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G31970.1AT STRS1 JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K14811KEGG Ribosome biogenesis JGI N/AIEA
PTHR24031PantherFam RNA HELICASE JGI N/AIEA
PF00270Pfam DEAD/DEAH box helicase JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA

Proteins Associated with Glyma.01g010400
LocusGene SymbolProtein Name
SLTI248 DEAD-box RNA helicase

Gene model name correspondences to Glyma.01g010400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g01390 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g010400
>Glyma.01g010400.1 sequence-type=CDS polypeptide=Glyma.01g010400.1.p locus=Glyma.01g010400 id=Glyma.01g010400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCGGAAACACGACGCCGTTTTGGCCAGCGAACCTGTCGCCGAAGAAGCCCCCTGCAGCCCTGAGCTCGATTCCGAGAAGAAGAAGAAGAAGAAAAAGAAGAACAAAAACAAAGACAAGCACCAAACCGAAAGCAGCCCCAAACGAAAGCTCGACGAACACGACCCCCAAAACGGCACCGAATCGAAGAAGAAAAAGAAGAAGCACCACGAGTCCAAGGGGAACGCCGAGGAAACCAACGGCGATAGCAACAACAACAACGGCGATGGTGCTAATCGCGAGGAAACGGCGACGGATGGGTCTGTTGTGGTCACCGGTAACAATGCGGGAGAGGCGAAATACGCCGCGGTGAAGAGCTTCGCGGATTCGGGGCTGCCGGAGAACGTGCTGGAGTGCTGCAAGGGTTTCGAGAAGCCTTCTCCGATTCAGTCCCGGGCGTGGCCTTTCTTATTGGACGGTCGTGATTTGATTGGAATTGCTGCCACTGGCTCAGGGAAGACGTTGGCGTTCGGCATACCGGCGGTTATGCATGTTTTGGGGAAGCGGAAGGGGAAAAGTTCCAAGGGACGAAACCCTCTCGGCCTCGTGCTCTCACCCACTAGAGAGCTAGCTCAACAGATATCAGATGTCATGTGTGATGCTGGTAGGTCTTGTGGTGTGCAATCAATCTGTTTGTATGGTGGAACCTCCAAAGGGCCACAAATCTCCTCACTAAAATCTGGCATTGACATTGTCATTGGAACCCCTGGTCGTATCCAGGATCTGATTGAAATGGGTATCTGTTGCCTAAAAGAAGTATCTTTTGTGGTACTTGATGAAGCTGATCGGATGCTTGACATGGGTTTTGAACAAATAGTTCGCTCTATACTGGGTCAAACGTGTTCTGATCGTCAAATGGTTATGTTCAGTGCTACATGGCCTTTGCCAGTTCATTACTTGGCACAGGAGTTTATGGATCCTAATCCTGTAAAAGTTGTTGTAGGCTCAGAAGACTTAGCTGCCAATCATGATGTCATGCAGATAGTTGAGGTCTTGGATGACCGTTCTCGTGATAAGCGCCTAGTTGCTTTACTGGAAAAGTACCACAAATCTCAGAGGAATCGAGTATTGGTTTTTGTTTTGTACAAATTGGAAGCCAAACGAGTTGAAAATATGCTTCAAGAAGGGGGTTGGAAGGTTGTATCAATACACGGGGACAAAGCCCAACATGATCGCACAAAGGCACTCTCATTGTTCAAGAATGCAAGCTGTCCTTTGATGATTGCTACTGATGTGGCCGCACGAGGATTGGATATTCCAGATGTTGAAGTAGTGATAAACTATAGTTTTCCTCTGACTACAGAAGATTATGTTCATAGAATTGGGCGAACTGGACGAGCTGGTAAAAAAGGTGTTGCCCATACATTCTTTATGCAGCAGAATAAGGGACTTGCTGGGGAGCTGGTGAATGTTTTAAGAGAAGCAGGGCAAATTGTACCGGATGCCCTCCTGAAATTTGGCACACATGTAAAGAAAAAGGAGTCCAAACTTTATGGGGCACACTTCAAGGAAATTCCTGTTGATGCTCCAAAGTCTCAAAAGAAAACATTTGACGACTCTGATGAAGACTAA
Predicted protein sequences of Glyma.01g010400
>Glyma.01g010400.1.p sequence-type=predicted peptide transcript=Glyma.01g010400.1 locus=Glyma.01g010400 id=Glyma.01g010400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGRKHDAVLASEPVAEEAPCSPELDSEKKKKKKKKNKNKDKHQTESSPKRKLDEHDPQNGTESKKKKKKHHESKGNAEETNGDSNNNNGDGANREETATDGSVVVTGNNAGEAKYAAVKSFADSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAVMHVLGKRKGKSSKGRNPLGLVLSPTRELAQQISDVMCDAGRSCGVQSICLYGGTSKGPQISSLKSGIDIVIGTPGRIQDLIEMGICCLKEVSFVVLDEADRMLDMGFEQIVRSILGQTCSDRQMVMFSATWPLPVHYLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRLVALLEKYHKSQRNRVLVFVLYKLEAKRVENMLQEGGWKVVSIHGDKAQHDRTKALSLFKNASCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKKTFDDSDED*






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