SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g004500

Feature Type:gene_model
Chromosome:Gm01
Start:434582
stop:441855
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g004500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29160.3AT SNF7.1 JGI N/AIEA
GO:0007034GO-bp vacuolar transport JGI N/AIEA
K12194KEGG Exosome JGI N/AIEA
KOG1656 KOG Protein involved in glucose derepression and pre-vacuolar endosome protein sorting JGI N/AIEA
PTHR22761PantherFam CHARGED MULTIVESICULAR BODY PROTEIN JGI N/AIEA
PF03357Pfam Snf7 JGI N/AIEA

Gene model name correspondences to Glyma.01g004500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g00760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g004500
>Glyma.01g004500.1 sequence-type=CDS polypeptide=Glyma.01g004500.1.p locus=Glyma.01g004500 id=Glyma.01g004500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTAGCCGGATGTTCGGTAAACCTAAACAGGAAACCAATGCTGTTGCCACTTTGGACAAGCTAAACGAGACACTTGAAATGCTGGAGAAAAAGGAGAAAGTGCTCCTTAAAAAGGTGGCAGCAGAAGTTGAAAAGGCCAAAGAATTCACAAGGGGGAAGAACAAAAGGGCGGCAATACAATGTCTGAAGAGGAAGAGGTTATATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAGTTGCGTATTCATGACCAGATGATAATGTTGGAAGGTGCTAAAGCCACCACAGAAACGGTAGACGCGTTAAGAACTGGAGCAGCTGCTATGAAGGCTATGCAAAAAGCAACGAATATTGATGATGTTGACAAGACTATGGATGAGATCAATGAACAGACTGAGAATATGAAACAGATTCAGGATGCATTGTCTGCTCCAATTGGTGCGGCTGCTGATTTTGACGAGGATGAATTGGAAGCAGAACTTGAAGAACTGGAGGGTGCTGAGTTGGAAGAACAGCTTCTTCAGCCAGCAACTACAGCTCCTGCGGCCCCAGTGCAGGTCCCAGCTGGGCAGCAACCTACTCGCCCAGTTCCCGCAAAGCGAACTCCGGAAGAAGATGAATTGGCAGCTTTGCAGGCTGAGATGGCACTTTGA

>Glyma.01g004500.2 sequence-type=CDS polypeptide=Glyma.01g004500.2.p locus=Glyma.01g004500 id=Glyma.01g004500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTAGCCGGATGTTCGGTAAACCTAAACAGGAAACCAATGCTGTTGCCACTTTGGACAAGCTAAACGAGACACTTGAAATGCTGGAGAAAAAGGAGAAAGTGCTCCTTAAAAAGGTGGCAGCAGAAGTTGAAAAGGCCAAAGAATTCACAAGGGGGAAGAACAAAAGGGCGGCAATACAATGTCTGAAGAGGAAGAGGTTATATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAGTTGCGTATTCATGACCAGATGATAATGTTGGAAGGTGCTAAAGCCACCACAGAAACGGTAGACGCGTTAAGAACTGGAGCAGCTGCTATGAAGGCTATGCAAAAAGCAACGAATATTGATGATGTTGACAAGACTATGGATGAGATCAATGAACAGACTGAGAATATGAAACAGATTCAGGATGCATTGTCTGCTCCAATTGGTGCGGCTGCTGATTTTGACGAGGATGAATTGGAAGCAGAACTTGAAGAACTGGAGGGTGCTGAGTTGGAAGAACAGCTTCTTCAGCCAGCAACTACAGCTCCTGCGGCCCCAGTGCAGGTCCCAGCTGGGCAGCAACCTACTCGCCCAGTTCCCGCAAAGCGAACTCCGGAAGAAGATGAATTGGCAGCTTTGCAGGCTGAGATGGCACTTTGA

>Glyma.01g004500.3 sequence-type=CDS polypeptide=Glyma.01g004500.3.p locus=Glyma.01g004500 id=Glyma.01g004500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACGCGTGGAGGAGGAGAGAGATGCTTTCTTCTTCTTCAATGGGTGTGGGCTTCGATGATTCGATTAGGCGAAGAGCTTCGTCCAAATTTCCCCATTTGCAGAGAGATTTTAGGGTTGTTTTGAGTTTGTGTGTATTTGTGGTTCTGGGTGTGGAAGTGGCTGTTATGTTCGTTTTGACGGTTATGTTGGTTGGAAGAGAAATGGCGGGGAGCATGATGGAGACTGAGACAGTCAGGAAGGAAAGGAATCATAGTGATTTTAAGGGAGATCGGCTGACGAATCGAGAGGATCTCATCGCTCGCAAGGGATTAGGGTTTCAATCGATCGCATCACATATCACAATCATGTTTAGCCGGATGTTCGGTAAACCTAAACAGGAAACCAATGCTGTTGCCACTTTGGACAAGCTAAACGAGACACTTGAAATGCTGGAGAAAAAGGAGAAAGTGCTCCTTAAAAAGGTGGCAGCAGAAGTTGAAAAGGCCAAAGAATTCACAAGGGGGAAGAACAAAAGGGCGGCAATACAATGTCTGAAGAGGAAGAGGTTATATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAGTTGCGTATTCATGACCAGATGATAATGTTGGAAGGTGCTAAAGCCACCACAGAAACGGTAGACGCGTTAAGAACTGGAGCAGCTGCTATGAAGGCTATGCAAAAAGCAACGAATATTGATGATGTTGACAAGACTATGGATGAGATCAATGAACAGACTGAGAATATGAAACAGATTCAGGATGCATTGTCTGCTCCAATTGGTGCGGCTGCTGATTTTGACGAGGATGAATTGGAAGCAGAACTTGAAGAACTGGAGGGTGCTGAGTTGGAAGAACAGCTTCTTCAGCCAGCAACTACAGCTCCTGCGGCCCCAGTGCAGGTCCCAGCTGGGCAGCAACCTACTCGCCCAGTTCCCGCAAAGCGAACTCCGGAAGAAGATGAATTGGCAGCTTTGCAGGCTGAGATGGCACTTTGA
Predicted protein sequences of Glyma.01g004500
>Glyma.01g004500.1.p sequence-type=predicted peptide transcript=Glyma.01g004500.1 locus=Glyma.01g004500 id=Glyma.01g004500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFSRMFGKPKQETNAVATLDKLNETLEMLEKKEKVLLKKVAAEVEKAKEFTRGKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPVQVPAGQQPTRPVPAKRTPEEDELAALQAEMAL*

>Glyma.01g004500.2.p sequence-type=predicted peptide transcript=Glyma.01g004500.2 locus=Glyma.01g004500 id=Glyma.01g004500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFSRMFGKPKQETNAVATLDKLNETLEMLEKKEKVLLKKVAAEVEKAKEFTRGKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPVQVPAGQQPTRPVPAKRTPEEDELAALQAEMAL*

>Glyma.01g004500.3.p sequence-type=predicted peptide transcript=Glyma.01g004500.3 locus=Glyma.01g004500 id=Glyma.01g004500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHAWRRREMLSSSSMGVGFDDSIRRRASSKFPHLQRDFRVVLSLCVFVVLGVEVAVMFVLTVMLVGREMAGSMMETETVRKERNHSDFKGDRLTNREDLIARKGLGFQSIASHITIMFSRMFGKPKQETNAVATLDKLNETLEMLEKKEKVLLKKVAAEVEKAKEFTRGKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPVQVPAGQQPTRPVPAKRTPEEDELAALQAEMAL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo