Glyma.01G222000

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Report for Sequence Feature Glyma.01G222000

Feature Type:	gene_model
Chromosome:	Gm01
Start:	55096892
stop:	55100326
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.01G222000

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G01370.1	AT	MAP kinase 4	JGI	N/A	IEA
GO:0000165	GO-bp	MAPK cascade	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	JGI	N/A	IEA
GO:0010468	GO-bp	regulation of gene expression	EnsemblGenomes	N/A	IEA
GO:0016310	GO-bp	phosphorylation	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0000166	GO-mf	nucleotide binding	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	JGI	N/A	IEA
GO:0004674	GO-mf	protein serine/threonine kinase activity	EnsemblGenomes	N/A	IEA
GO:0004707	GO-mf	MAP kinase activity	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
GO:0016301	GO-mf	kinase activity	EnsemblGenomes	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
KOG0660	KOG	Mitogen-activated protein kinase	JGI	N/A	IEA
PTHR24055	Panther	MITOGEN-ACTIVATED PROTEIN KINASE	JGI	N/A	IEA
PTHR24055:SF69	Panther		JGI	N/A	IEA
PF00069	PFAM	Protein kinase domain	JGI	N/A	IEA

Proteins Associated with Glyma.01G222000

Locus	Gene Symbol	Protein Name
	MPK4	mitogen-activated protein kinase 4

Expression Patterns of Glyma.01G222000

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.01G222000

Paralog	Evidence	Comments
Glyma.11g021800	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01G222000 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g222000	Wm82.a4.v1	ISS	As supplied by JGI
Glyma01g43100	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.01G222000

Limit To All Plant Sequences

>Glyma.01g222000.1 sequence-type=CDS polypeptide=Glyma.01g222000.1.p locus=Glyma.01g222000 ID=Glyma.01g222000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTAGCAAAGGCAAACGCAAAGAGCAAGAATCAATAATAACGAGGGTTATGGCTCACGGAGGTAGATACGTGCAATACAACGTGTACGGAAACTTGTTCGAGGTCTCCTCCAAGTATGTCCCTCCCATTCGCCCTGTCGGTAGAGGCGCATACGGCATCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATAAAGAAGATTGGTAACGCCTTTGACAACATCATTGACGCTAAACGAACTTTGAGGGAAATCAAGCTCCTTCGCCACATGGACCATGAAAATATAATTGCCATTAGGGATATCATACGACCTCCCAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTGACCAACCTCTTAACGATGACCACTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATATCTTGCACCGTGATCTTAAGCCCAGTAATTTGCTTCTCAATTCAAACTGTGACCTTAAAATTGCGGACTTTGGTCTGGCAAGGACAACATCTGAAACGGATTTCATGACGGAGTATGTTGTCACACGATGGTACCGAGCCCCAGAATTGCTTCTTAATTGTTCAGAGTACACCTCCGCGATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGAAAAGATTATGTTCATCAACTGAGGCTTATAACAGAGTTATTAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGGAAATGCCAAAAGATATGTTCGACAGCTTCCACAATATAGGAAGCAAAATTTCTCCGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCATCCATATCTTTCATCACTTCATGACATCAATGATGAACCGGTTGGTCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCGGTGAAGTACAATCCAGATCCACCCAGTCAGTAA

Predicted protein sequences of Glyma.01G222000

Limit To All Plant Sequences

>Glyma.01g222000.1.p sequence-type=predicted peptide transcript=Glyma.01g222000.1 locus=Glyma.01g222000 ID=Glyma.01g222000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSKGKRKEQESIITRVMAHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGAYGIVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIRDIIRPPRKDAFNDVYIVYELMDTDLHQIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANILHRDLKPSNLLLNSNCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSGNAKRYVRQLPQYRKQNFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWRESVKYNPDPPSQ*

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