Glyma.01G167200

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01G167200

Feature Type:	gene_model
Chromosome:	Gm01
Start:	50500662
stop:	50505365
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.01G167200

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G36120.1	AT	Plant protein of unknown function (DUF869)	JGI	N/A	IEA
PF05911	PFAM	Plant protein of unknown function (DUF869)	JGI	N/A	IEA

Proteins Associated with Glyma.01G167200

Locus	Gene Symbol	Protein Name
	bZIP5	Basic leucine zipper transcription factor-like protein gene 5

Expression Patterns of Glyma.01G167200

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.01G167200

Paralog	Evidence	Comments
Glyma.11g076100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01G167200 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g167200	Wm82.a4.v1	ISS	As supplied by JGI
Glyma01g37240	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.01G167200

Limit To All Plant Sequences

>Glyma.01g167200.2 sequence-type=transcript locus=Glyma.01g167200 ID=Glyma.01g167200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGTTTGCCAACTTATGTGTTGCAAAAACAAGTCATGTTTCTGGGGCCTGGGGCGGTGTATATTAGTGCATTCTACTTTGTTACTGCTGTTTTAATCTGGGGTTCTCTTTGTTGGATTTTGAAATTCATGAGGGTAGGATTTTGAGATGGACCGCCGGGGTTGGCTATGGAAGAAAAGATCATCCGATAAAAACATAAAGGTTGAGAATGAGAAACCAGTGTCTACTTCTGAATTTGTTGGTCCTACCTTGTTTTCTGTGGCACATGTAGGAGATCAGCAAGACAGCAGCAAAAATAAGAACTATGTTCAAATAACAATGGAATCATACGCACATATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAAGTAAAAGCTTTGGAAGAAAAGCTATCTGCAGTTTATTCAGAATTAAATAACAAGGATGATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAATCTCAGGTTGGGAGAAAGCTGATGCCGAAGTTGTTTCCTTAAGATGTCAACTTGAATCTTTGTCTCTCTCTAAGCTTACTGTTGATGAGAAAGCTGCTCACCTAGATGAAGCCCTAAAAGAGTGCATGAAGCAGATAAGAACAGTAAAGGAAGAAAGTGACCAGAAACTGCAGGAGGTAATTCTTATGAAATCTCATCAGTGGGAGAAAATCAAGTTAGAACTTGAAGCACAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAATGAAAATGCTGCCCTTCTAAAATCAGTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAGAAGTCTGAAGCAGAGGCAGAGGTAGAGCATCTAGAGAAGAGTGTTCAATCAAAAGAAAAAGAAATAACTTCACTAAAGTATGAGCTGCACATGATTTCTAAGGAGCTGGATATCCGTAATGAAGAGAAGAATATGATTATGAGATCGGCAGAAGTGGCAAACAAGCAACACACTGAGGATGTCAAGAACATCACCAAGCTAGAAAGTGAGTGCCAACGACTTCGTGGTCTTTTGAGAAAAAAGTTACCTGGGCCTGCTGCATTGGCACAAATGAAGTTAGAAGTTGAGAGTTCACACCATGTCTTCAGTGCAACCCATCTGAGAAAAACTAGTTCAAAAACTGATAGCCTGCAAGAATCCGAGTTTCTTACCAAACAGTTGAAGGTGTTGGAAGAAGAAACAAAGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAGAAACTTGTATGCTAAAACGGTTGGCAGGCTTAAGTGCTTGGAAGCAGAGATGCATCAAGAAAGAAACGCCCAGAAAGCAATTTTGGCAACCAATTATGGAAACTCCTTCAGTAGAGTTTATAGCTATCCACCAACCATCACTTCTATCCCTGACAATGGGCATGAGGATTCAGAAAGTCCTGTTGAGTCAAGTGCAGCATCAATTCCTGACCATTCTGATATCAGGAGGATTGGAAGTGTAGGTAAATTTGAGAATCATAAGACTGAAACTATCTCAGAACTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTTGCATCATTAGTAAAGCTAATGATGATGCTGAAGATAAAAAGGAGACTAGCTGTTTATCTTCAAATAAAAATTGTTTTGATGGGACAAACCAAACAATAGAACCTGAGGCAGCTGAATATGATGAGCATATGCAAGATCTTAAGGAAAAAAGGATGATGTTAGAGGAAAACATGCAGCTTCTAGAAGAACTGAAAGCACAATTGGTGTCGTCTAATAAATCATGTAGTTTAGCTGAGATTCAGCTGAAATGCATGACTGAGTCTTACAAGTCACTTCAAACACGTGTAGAGGAGTTAGAAGCTGAAAATAAGTATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGTCATCATGATGCTTTGGTGAGGTACAGAGAAATTAAAGAGAAAATGCAAAGGGACAAGTGCTTGGTGTGTGCAGCAAATTCGGTGGCAAATTCTGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGTCAGGAAACTCTGTCTATACTTGGTAGGCAATTGCAAGCTATGTGCCCTCAGATAGGGGTAACCATGACTCATCATAGTAAAAGGCTTCAAATGAATGAAAAGTTAGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGGTCATGTAACTCAAATGAAATTGATCATGCTGAGGCATGTAGCATAGTGTCTGACATTCAAGGAGTGACTGATGAGTTTTCATCGCATAACTCTGGTGCCACATCATGTCTTTCAGACACCGAAGGCAACTTTTGGTTAAACACTTGAGTAACTCTTAAGTAGGCTCAAACCACCCAGGTTAAACTCTTACTGAATCAAATTCCCATTCTTCTGCCACTGTTACATGGAAGAATGCTCATGGTTTGAGCCACTTCTTTTTGTCAGGAGAGTAGTCACTAACATTGTTAATTCTCAAGTGTCATCGAGAGCTCCCCGATGATGTTGTACATAGACTATATAGTCAAATTTTGTGGAGAATGTTGTGTGTAATTCTCTTCAGTATGTTGATTTTGGGTAAACTTTGGTTCTTATTCCAGCACTTGTATTCCATGAATCTGTGAGGGTTCACCAATCTGGTTATAAAACATACAGATCCTTTTTGCTCTTTC

Coding sequences of Glyma.01G167200

Limit To All Plant Sequences

>Glyma.01g167200.1 sequence-type=CDS polypeptide=Glyma.01g167200.1.p locus=Glyma.01g167200 ID=Glyma.01g167200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACCGCCGGGGTTGGCTATGGAAGAAAAGATCATCCGATAAAAACATAAAGGTTGAGAATGAGAAACCAGTGTCTACTTCTGAATTTGTTGGTCCTACCTTGTTTTCTGTGGCACATGTAGGAGATCAGCAAGACAGCAGCAAAAATAAGAACTATGTTCAAATAACAATGGAATCATACGCACATATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAAGTAAAAGCTTTGGAAGAAAAGCTATCTGCAGTTTATTCAGAATTAAATAACAAGGATGATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAATCTCAGGTTGGGAGAAAGCTGATGCCGAAGTTGTTTCCTTAAGATGTCAACTTGAATCTTTGTCTCTCTCTAAGCTTACTGTTGATGAGAAAGCTGCTCACCTAGATGAAGCCCTAAAAGAGTGCATGAAGCAGATAAGAACAGTAAAGGAAGAAAGTGACCAGAAACTGCAGGAGGTAATTCTTATGAAATCTCATCAGTGGGAGAAAATCAAGTTAGAACTTGAAGCACAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAATGAAAATGCTGCCCTTCTAAAATCAGTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAGAAGTCTGAAGCAGAGGCAGAGGTAGAGCATCTAGAGAAGAGTGTTCAATCAAAAGAAAAAGAAATAACTTCACTAAAGTATGAGCTGCACATGATTTCTAAGGAGCTGGATATCCGTAATGAAGAGAAGAATATGATTATGAGATCGGCAGAAGTGGCAAACAAGCAACACACTGAGGATGTCAAGAACATCACCAAGCTAGAAAGTGAGTGCCAACGACTTCGTGGTCTTTTGAGAAAAAAGTTACCTGGGCCTGCTGCATTGGCACAAATGAAGTTAGAAGTTGAGAGTTCACACCATGTCTTCAGTGCAACCCATCTGAGAAAAACTAGTTCAAAAACTGATAGCCTGCAAGAATCCGAGTTTCTTACCAAACAGTTGAAGGTGTTGGAAGAAGAAACAAAGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAGAAACTTGTATGCTAAAACGGTTGGCAGGCTTAAGTGCTTGGAAGCAGAGATGCATCAAGAAAGAAACGCCCAGAAAGCAATTTTGGCAACCAATTATGGAAACTCCTTCAGTAGAGTTTATAGCTATCCACCAACCATCACTTCTATCCCTGACAATGGGCATGAGGATTCAGAAAGTCCTGTTGAGTCAAGTGCAGCATCAATTCCTGACCATTCTGATATCAGGAGGATTGGAAGTGTAGGTAAATTTGAGAATCATAAGACTGAAACTATCTCAGAACTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTTGCATCATTAGTAAAGCTAATGATGATGCTGAAGATAAAAAGGAGACTAGCTGTTTATCTTCAAATAAAAATTGTTTTGATGGGACAAACCAAACAATAGAACCTGAGGCAGCTGAATATGATGAGCATATGCAAGATCTTAAGGAAAAAAGGATGATGTTAGAGGAAAACATGCAGCTTCTAGAAGAACTGAAAGCACAATTGGTGTCGTCTAATAAATCATGTAGTTTAGCTGAGATTCAGCTGAAATGCATGACTGAGTCTTACAAGTCACTTCAAACACGTGTAGAGGAGTTAGAAGCTGAAAATAAGTATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGTCATCATGATGCTTTGGTGAGGTACAGAGAAATTAAAGAGAAAATGCAAAGGGACAAGTGCTTGGTGTGTGCAGCAAATTCGGTGGCAAATTCTGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGTCAGGAAACTCTGTCTATACTTGGTAGGCAATTGCAAGCTATGTGCCCTCAGATAGGGGTAACCATGACTCATCATAGTAAAAGGCTTCAAATGAATGAAAAGTTAGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGGTCATGTAACTCAAATGAAATTGATCATGCTGAGGCATGTAGCATAGTGTCTGACATTCAAGGAGTGACTGATGAGTTTTCATCGCATAACTCTGGTGCCACATCATGTCTTTCAGACACCGAAGGCAACTTTTGGTTAAACACTTGA

>Glyma.01g167200.2 sequence-type=CDS polypeptide=Glyma.01g167200.2.p locus=Glyma.01g167200 ID=Glyma.01g167200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACCGCCGGGGTTGGCTATGGAAGAAAAGATCATCCGATAAAAACATAAAGGTTGAGAATGAGAAACCAGTGTCTACTTCTGAATTTGTTGGTCCTACCTTGTTTTCTGTGGCACATGTAGGAGATCAGCAAGACAGCAGCAAAAATAAGAACTATGTTCAAATAACAATGGAATCATACGCACATATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAAGTAAAAGCTTTGGAAGAAAAGCTATCTGCAGTTTATTCAGAATTAAATAACAAGGATGATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAATCTCAGGTTGGGAGAAAGCTGATGCCGAAGTTGTTTCCTTAAGATGTCAACTTGAATCTTTGTCTCTCTCTAAGCTTACTGTTGATGAGAAAGCTGCTCACCTAGATGAAGCCCTAAAAGAGTGCATGAAGCAGATAAGAACAGTAAAGGAAGAAAGTGACCAGAAACTGCAGGAGGTAATTCTTATGAAATCTCATCAGTGGGAGAAAATCAAGTTAGAACTTGAAGCACAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAATGAAAATGCTGCCCTTCTAAAATCAGTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAGAAGTCTGAAGCAGAGGCAGAGGTAGAGCATCTAGAGAAGAGTGTTCAATCAAAAGAAAAAGAAATAACTTCACTAAAGTATGAGCTGCACATGATTTCTAAGGAGCTGGATATCCGTAATGAAGAGAAGAATATGATTATGAGATCGGCAGAAGTGGCAAACAAGCAACACACTGAGGATGTCAAGAACATCACCAAGCTAGAAAGTGAGTGCCAACGACTTCGTGGTCTTTTGAGAAAAAAGTTACCTGGGCCTGCTGCATTGGCACAAATGAAGTTAGAAGTTGAGAGTTCACACCATGTCTTCAGTGCAACCCATCTGAGAAAAACTAGTTCAAAAACTGATAGCCTGCAAGAATCCGAGTTTCTTACCAAACAGTTGAAGGTGTTGGAAGAAGAAACAAAGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAGAAACTTGTATGCTAAAACGGTTGGCAGGCTTAAGTGCTTGGAAGCAGAGATGCATCAAGAAAGAAACGCCCAGAAAGCAATTTTGGCAACCAATTATGGAAACTCCTTCAGTAGAGTTTATAGCTATCCACCAACCATCACTTCTATCCCTGACAATGGGCATGAGGATTCAGAAAGTCCTGTTGAGTCAAGTGCAGCATCAATTCCTGACCATTCTGATATCAGGAGGATTGGAAGTGTAGGTAAATTTGAGAATCATAAGACTGAAACTATCTCAGAACTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTTGCATCATTAGTAAAGCTAATGATGATGCTGAAGATAAAAAGGAGACTAGCTGTTTATCTTCAAATAAAAATTGTTTTGATGGGACAAACCAAACAATAGAACCTGAGGCAGCTGAATATGATGAGCATATGCAAGATCTTAAGGAAAAAAGGATGATGTTAGAGGAAAACATGCAGCTTCTAGAAGAACTGAAAGCACAATTGGTGTCGTCTAATAAATCATGTAGTTTAGCTGAGATTCAGCTGAAATGCATGACTGAGTCTTACAAGTCACTTCAAACACGTGTAGAGGAGTTAGAAGCTGAAAATAAGTATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGTCATCATGATGCTTTGGTGAGGTACAGAGAAATTAAAGAGAAAATGCAAAGGGACAAGTGCTTGGTGTGTGCAGCAAATTCGGTGGCAAATTCTGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGTCAGGAAACTCTGTCTATACTTGGTAGGCAATTGCAAGCTATGTGCCCTCAGATAGGGGTAACCATGACTCATCATAGTAAAAGGCTTCAAATGAATGAAAAGTTAGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGGTCATGTAACTCAAATGAAATTGATCATGCTGAGGCATGTAGCATAGTGTCTGACATTCAAGGAGTGACTGATGAGTTTTCATCGCATAACTCTGGTGCCACATCATGTCTTTCAGACACCGAAGGCAACTTTTGGTTAAACACTTGA

Predicted protein sequences of Glyma.01G167200

Limit To All Plant Sequences

>Glyma.01g167200.1.p sequence-type=predicted peptide transcript=Glyma.01g167200.1 locus=Glyma.01g167200 ID=Glyma.01g167200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDRRGWLWKKRSSDKNIKVENEKPVSTSEFVGPTLFSVAHVGDQQDSSKNKNYVQITMESYAHMSGLEDQVVNLEDQVKALEEKLSAVYSELNNKDDLVKQHAKVAEEAISGWEKADAEVVSLRCQLESLSLSKLTVDEKAAHLDEALKECMKQIRTVKEESDQKLQEVILMKSHQWEKIKLELEAQIDNLDEGLRELANENAALLKSVQESSNKIVKLKEEKSEAEAEVEHLEKSVQSKEKEITSLKYELHMISKELDIRNEEKNMIMRSAEVANKQHTEDVKNITKLESECQRLRGLLRKKLPGPAALAQMKLEVESSHHVFSATHLRKTSSKTDSLQESEFLTKQLKVLEEETKTLKEALASSNAELQASRNLYAKTVGRLKCLEAEMHQERNAQKAILATNYGNSFSRVYSYPPTITSIPDNGHEDSESPVESSAASIPDHSDIRRIGSVGKFENHKTETISELMDDFLEVEKMACLSDNGGVPLCIISKANDDAEDKKETSCLSSNKNCFDGTNQTIEPEAAEYDEHMQDLKEKRMMLEENMQLLEELKAQLVSSNKSCSLAEIQLKCMTESYKSLQTRVEELEAENKYLKEKMDELKNDLAEEKQSHHDALVRYREIKEKMQRDKCLVCAANSVANSGKDKELAAAEKKLAECQETLSILGRQLQAMCPQIGVTMTHHSKRLQMNEKLAKPTYGWSNSYGSCNSNEIDHAEACSIVSDIQGVTDEFSSHNSGATSCLSDTEGNFWLNT*

>Glyma.01g167200.2.p sequence-type=predicted peptide transcript=Glyma.01g167200.2 locus=Glyma.01g167200 ID=Glyma.01g167200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDRRGWLWKKRSSDKNIKVENEKPVSTSEFVGPTLFSVAHVGDQQDSSKNKNYVQITMESYAHMSGLEDQVVNLEDQVKALEEKLSAVYSELNNKDDLVKQHAKVAEEAISGWEKADAEVVSLRCQLESLSLSKLTVDEKAAHLDEALKECMKQIRTVKEESDQKLQEVILMKSHQWEKIKLELEAQIDNLDEGLRELANENAALLKSVQESSNKIVKLKEEKSEAEAEVEHLEKSVQSKEKEITSLKYELHMISKELDIRNEEKNMIMRSAEVANKQHTEDVKNITKLESECQRLRGLLRKKLPGPAALAQMKLEVESSHHVFSATHLRKTSSKTDSLQESEFLTKQLKVLEEETKTLKEALASSNAELQASRNLYAKTVGRLKCLEAEMHQERNAQKAILATNYGNSFSRVYSYPPTITSIPDNGHEDSESPVESSAASIPDHSDIRRIGSVGKFENHKTETISELMDDFLEVEKMACLSDNGGVPLCIISKANDDAEDKKETSCLSSNKNCFDGTNQTIEPEAAEYDEHMQDLKEKRMMLEENMQLLEELKAQLVSSNKSCSLAEIQLKCMTESYKSLQTRVEELEAENKYLKEKMDELKNDLAEEKQSHHDALVRYREIKEKMQRDKCLVCAANSVANSGKDKELAAAEKKLAECQETLSILGRQLQAMCPQIGVTMTHHSKRLQMNEKLAKPTYGWSNSYGSCNSNEIDHAEACSIVSDIQGVTDEFSSHNSGATSCLSDTEGNFWLNT*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain