Glyma.01G164700

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Report for Sequence Feature Glyma.01G164700

Feature Type:	gene_model
Chromosome:	Gm01
Start:	50218315
stop:	50222373
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.01G164700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G35000.1	AT	ascorbate peroxidase 3	JGI	N/A	IEA
GO:0000302	GO-bp	response to reactive oxygen species	EnsemblGenomes	N/A	IEA
GO:0006979	GO-bp	response to oxidative stress	EnsemblGenomes	N/A	IEA
GO:0006979	GO-bp	response to oxidative stress	JGI	N/A	IEA
GO:0034599	GO-bp	cellular response to oxidative stress	EnsemblGenomes	N/A	IEA
GO:0042744	GO-bp	hydrogen peroxide catabolic process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0098869	GO-bp	cellular oxidant detoxification	EnsemblGenomes	N/A	IEA
GO:0009507	GO-cc	chloroplast	EnsemblGenomes	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0004130	GO-mf	cytochrome-c peroxidase activity	EnsemblGenomes	N/A	IEA
GO:0004601	GO-mf	peroxidase activity	EnsemblGenomes	N/A	IEA
GO:0004601	GO-mf	peroxidase activity	JGI	N/A	IEA
GO:0020037	GO-mf	heme binding	EnsemblGenomes	N/A	IEA
GO:0020037	GO-mf	heme binding	JGI	N/A	IEA
PF00141	PFAM	Peroxidase	JGI	N/A	IEA
PWY-2261	SoyCyc9	ascorbate glutathione cycle	Plant Metabolic Network		ISS
PWY-6959	SoyCyc9	L-ascorbate degradation V	Plant Metabolic Network		ISS
GN7V-51969	SoyCyc9-rxn	L-ascorbate peroxidase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.01G164700

Locus	Gene Symbol	Protein Name
	APX-5a1	Ascorbate peroxidase 5 gene a1

Expression Patterns of Glyma.01G164700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.01G164700

Paralog	Evidence	Comments
Glyma.11g078400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01G164700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.01g164700	Wm82.a4.v1	ISS	As supplied by JGI
Glyma01g36940	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.01G164700

Limit To All Plant Sequences

>Glyma.01g164700.1 sequence-type=CDS polypeptide=Glyma.01g164700.1.p locus=Glyma.01g164700 ID=Glyma.01g164700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGAACCTGTTGTTGACGACGAATATCTCAAGGAAATAGACAAGGCTCGACGTGAACTTCGCGCTTTCATCACCAGCAACCAATGCGCTCCTCTCATGCTTCGATTAGCGTGGAACGATGCTGCCACCTACGATGCCAGAAACAGAGCAGGAGGCCCCAACGGTTCTATCAGGACTGATAAAGAGTTGAAACACGAAGCAAACGAGGGATTGTTAAAAGCAACTCAATTATGTGAGCATGTGAAGGCCAAACTTAAAAAAGTTTCATACGCAGACCTTTACCAGCTAGCTGGTGTTGTTGCAATAGAGGTCTCTGGGGGTCCAACTATTGAATTTTTGCCTGGGAGAAAAGATTCAATGGAATCTTCAGCAGAAGGGCTTCTTCCAGATGTCAAACAAGGTGCATCGATTATAAGGAATATATTTTCTCGTATGGGTATAAGTGATGATAAACACATCGTTGCCCTATGTGGAGGCCTCACTTGGGGGGAAACACTTAAAGATCGTTCTGACTCTAAAGGTCAATGGCCAAAGGACCCTTTGAAGTTTGATAACTCCTATTATAAGAAAATATTGAGTAAGGATTTATCATCTAGGCTTCCCATAGAAGATGCTTTACTAACCGATCAAAGCTTCCGCCGCCATGTTGAAGAGTATTCAAAGGATGAGAATAGTTTCTTCAAAGAATATGCAATGTCACATAAGAAACTCTCAGAACTAGGCTACAATCTCAAGAAGCAAAATCAATCAAAGGTACCAGATGAGGAGCAAAATCAGCCCAAGGGACCATATGAGAAGCTAAATCAGCACAGGGGACTTATAGGAATCGGTATAGTATCCGTGGTGACCGTGATATTAGGTTACTTACTCAAGAGGAAGAAAAACCAGTTGAAGAAATGA

Predicted protein sequences of Glyma.01G164700

Limit To All Plant Sequences

>Glyma.01g164700.1.p sequence-type=predicted peptide transcript=Glyma.01g164700.1 locus=Glyma.01g164700 ID=Glyma.01g164700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAEPVVDDEYLKEIDKARRELRAFITSNQCAPLMLRLAWNDAATYDARNRAGGPNGSIRTDKELKHEANEGLLKATQLCEHVKAKLKKVSYADLYQLAGVVAIEVSGGPTIEFLPGRKDSMESSAEGLLPDVKQGASIIRNIFSRMGISDDKHIVALCGGLTWGETLKDRSDSKGQWPKDPLKFDNSYYKKILSKDLSSRLPIEDALLTDQSFRRHVEEYSKDENSFFKEYAMSHKKLSELGYNLKKQNQSKVPDEEQNQPKGPYEKLNQHRGLIGIGIVSVVTVILGYLLKRKKNQLKK*

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