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Report for Sequence Feature Glyma.01G145800

Feature Type:gene_model
Chromosome:Gm01
Start:48067074
stop:48068002
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01G145800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G14147.1AT protein binding JGI N/AIEA
GO:0030041GO-bp actin filament polymerization EnsemblGenomesN/AIEA
GO:0030041GO-bp actin filament polymerization JGI N/AIEA
GO:0030833GO-bp regulation of actin filament polymerization EnsemblGenomesN/AIEA
GO:0034314GO-bp Arp2/3 complex-mediated actin nucleation EnsemblGenomesN/AIEA
GO:0034314GO-bp Arp2/3 complex-mediated actin nucleation JGI N/AIEA
GO:0005856GO-cc cytoskeleton JGI N/AIEA
GO:0005885GO-cc Arp2/3 protein complex EnsemblGenomesN/AIEA
GO:0005885GO-cc Arp2/3 protein complex JGI N/AIEA
GO:0015629GO-cc actin cytoskeleton EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
PTHR22629Panther ARP2/3 COMPLEX 20 KD SUBUNIT JGI N/AIEA
PF05856PFAM ARP2/3 complex 20 kDa subunit (ARPC4) JGI N/AIEA

Expression Patterns of Glyma.01G145800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01G145800 not represented in the dataset
Glyma.01G145800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.01G145800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g34750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01G145800
>Glyma.01g145800.1 sequence-type=CDS polypeptide=Glyma.01g145800.1.p locus=Glyma.01g145800 ID=Glyma.01g145800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGGGCGATCACCACTCACCAGAGACTTCTAACTTATATCATTGAAATCCATTTTGATAACATTATATTGTTATTAATCCCTGTTCCGTTATTCTTTACAACATTAGGGAGAATTAATATCATCACTGGTCCTAATTTTTCTGGAAAAAATATCTATCTAAAGCAAGTCATCAATGAGCTTGAAAACATATTGACCAAAAAATTTCTAAGATTTTTGTCAATGAGAGTCGAGGCTTTCCAAGTACTGAGGAGAAAGCTTGTTCAGGGATATGACATTAGCTTCCTTATAACAAATTACCACTGTGAGGATATGACATTAGCTTCCTTTTTAAAATTTTAG
Predicted protein sequences of Glyma.01G145800
>Glyma.01g145800.1.p sequence-type=predicted peptide transcript=Glyma.01g145800.1 locus=Glyma.01g145800 ID=Glyma.01g145800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERAITTHQRLLTYIIEIHFDNIILLLIPVPLFFTTLGRINIITGPNFSGKNIYLKQVINELENILTKKFLRFLSMRVEAFQVLRRKLVQGYDISFLITNYHCEDMTLASFLKF*






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