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Report for Sequence Feature Glyma.01G143600

Feature Type:gene_model
Chromosome:Gm01
Start:47724018
stop:47724800
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01G143600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G19950.1AT RING/U-box superfamily protein JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding EnsemblGenomesN/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
PTHR22763Panther RING ZINC FINGER PROTEIN JGI N/AIEA
PF00097PFAM Zinc finger, C3HC4 type (RING finger) JGI N/AIEA

Expression Patterns of Glyma.01G143600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01G143600 not represented in the dataset
Glyma.01G143600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.01G143600
>Glyma.01g143600.1 sequence-type=CDS polypeptide=Glyma.01g143600.1.p locus=Glyma.01g143600 ID=Glyma.01g143600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGATCGAACCTGCAAACATTAGTTCTTCGTCATCCTTCAATATCAACCCCAAAATTGTTGAAGAAAGAATGGGTCCCTACAACATTCGTGTGATAAATGAACAAGTGGTGAAGCCCAATCCCAGAGATACATTGAGATTCAATGTGACTGTTACCCTTCGACAATTTTCAATTTATGACTGGCGTCTGCGTCTCATAAGAACCTCAACCTTGTTGGAAACTTCAACATCCATAAGCTTCCAAAGCTTGTTTGAAGATAATCAAGATTTTTTACGATCAGTATTATCCAACCCAGAATGTTTTCTCTACTTCATCCCAAGAAGTTTTGATCAAATATCACGGAATATTGTTTCCGTTGTTCAACGAGCCTTGGAGGTTCAGGGCTCCCCTTCTTCGGCTGAGTCTGCAGATTTCGAATGCGAAGTGTTCCCTTTGACTTTAGATATTTTCGTGGACATGCTGGAAGAAGTAGATGAAGAAACGCTTGCACTAATAGAAGAGGAGTCCATACAGCAAGAGGTCGCAATGATTCCAGCCTCCAATGAAGCCATACACTCCCTGCAAGCGTTCACAGATCCACTCTTCCTCAAGACTGAAAAGTGTAATATTTGCATGGATGAGTTTTATGCTGAAGAGGGTAATGAAGATGATGTCAAGTTATTGTCGTCTTCGTCAATGCCATGCGGTCATGTGTTTCATCATCAATGCATCGTGAAGTGGCTGCAAACCAGTCACACGTGTCCCTTGTGTCGCTACCCTATGCCCTCTGTCCACGACTAG
Predicted protein sequences of Glyma.01G143600
>Glyma.01g143600.1.p sequence-type=predicted peptide transcript=Glyma.01g143600.1 locus=Glyma.01g143600 ID=Glyma.01g143600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMIEPANISSSSSFNINPKIVEERMGPYNIRVINEQVVKPNPRDTLRFNVTVTLRQFSIYDWRLRLIRTSTLLETSTSISFQSLFEDNQDFLRSVLSNPECFLYFIPRSFDQISRNIVSVVQRALEVQGSPSSAESADFECEVFPLTLDIFVDMLEEVDEETLALIEEESIQQEVAMIPASNEAIHSLQAFTDPLFLKTEKCNICMDEFYAEEGNEDDVKLLSSSSMPCGHVFHHQCIVKWLQTSHTCPLCRYPMPSVHD*






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