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Report for Sequence Feature Glyma.01G125500

Feature Type:gene_model
Chromosome:Gm01
Start:43398981
stop:43401979
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01G125500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G09360.1AT Cyclin/Brf1-like TBP-binding protein JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006359GO-bp regulation of transcription by RNA polymerase III EnsemblGenomesN/AIEA
GO:0006383GO-bp transcription by RNA polymerase III EnsemblGenomesN/AIEA
GO:0070897GO-bp DNA-templated transcriptional preinitiation complex assembly EnsemblGenomesN/AIEA
GO:0000126GO-cc transcription factor TFIIIB complex EnsemblGenomesN/AIEA
GO:0001026GO-mf TFIIIB-type transcription factor activity EnsemblGenomesN/AIEA

Expression Patterns of Glyma.01G125500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01G125500 not represented in the dataset
Glyma.01G125500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.01G125500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.01g125500 Wm82.a4.v1ISS As supplied by JGI


Coding sequences of Glyma.01G125500
>Glyma.01g125500.1 sequence-type=CDS polypeptide=Glyma.01g125500.1.p locus=Glyma.01g125500 ID=Glyma.01g125500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGTACTACAGTCACCGTGCCAAAAATGTCGCCGGCCAGCGACTAGATGATGGTTTCTTATGTTGTGGAAGTTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAGCCTTCATTTGTTAAGAATGCGGTAGGGCAGAGTAAATTATCAGGCAATTATGTAAGAATAGTTCAAAGTGAGTACTCTGAATCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATTAAATATTTAAGTTTTGGCCTTGGAGTTAATGATGAACATATGGCTGAACAAGCTTTGACCTTTTATAAAGTAAAGACCAGTTTTGACTTACTCATTTTAAACTTGCTTTCTATTTATTTGCACATTTTTTGA
Predicted protein sequences of Glyma.01G125500
>Glyma.01g125500.1.p sequence-type=predicted peptide transcript=Glyma.01g125500.1 locus=Glyma.01g125500 ID=Glyma.01g125500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVYYSHRAKNVAGQRLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAVGQSKLSGNYVRIVQSEYSESRQRTLDRAYDEIKYLSFGLGVNDEHMAEQALTFYKVKTSFDLLILNLLSIYLHIF*






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