SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01G064200

Feature Type:gene_model
Chromosome:Gm01
Start:9477370
stop:9481961
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01G064200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G69120.1AT AGL7,AP1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
K09264KEGG Transcription factors JGI N/AIEA
KOG0014 KOG MADS box transcription factor JGI N/AIEA
PTHR11945PantherFam MADS BOX PROTEIN JGI N/AIEA
PF00319Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) JGI N/AIEA
PF01486Pfam K-box region JGI N/AIEA

Proteins Associated with Glyma.01G064200
LocusGene SymbolProtein Name
AP1b Apetella 1 gene b

Gene model name correspondences to Glyma.01G064200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.01g064200 Wm82.a4.v1ISS As supplied by JGI
Glyma01g08150 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01G064200
>Glyma.01g064200.1 sequence-type=CDS polypeptide=Glyma.01g064200.1.p locus=Glyma.01g064200 id=Glyma.01g064200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAGGGGTAAGGTACAGCTGAAGAGGATAGAGAACAAGATCAATCGCCAGGTAACTTTCTCCAAAAGGAGAAGTGGGTTGCTCAAGAAAGCTCATGAGATCTCTGTACTCTGTGATGCTGAGGTAGCTTTGATTGTCTTCTCTCACAAAGGAAAGCTCTTTGAGTATGCTACTGATTCATGCATGGAGAAGATACTGGAACGCCACGAAAGGTATGCCTATGCAGAGAGGCAGCTAGTAGCAAATGATTCTGAAACACAGGGAAACTGGACCATTGAATACACTAGACTGAAGGCAAAGATTGACCTTTTACAGAGAAACCACAGGCACTATATGGGAGAAGATTTGGCTTCAATGAGCCTCAAAGAGCTTCAGAGTTTGGAGCAGCAGTTGGATACTGCTATCAAAAACATCCGCACAAGGAGGAATGATCTCATGTACGCTTCCATTTCTGAGCTTCAAAAAAAGGAGAAAATGATACAAGAGCAGAATAACATCCTTGCAAAGAAGATCAAGGAGAAAGAGCAGGCAGTAGCACAGCAAGCTGCACAATGGGAGCAGCCAAACTACAGGGTTGATACATCTTTCATGCCACAGCAGCAACCCCTTCGCACCAGTTTGAACATAGGCGGCAATAATTACAATCAGGAAGCTGCACCAGAACTAGGAAGGAATGGTCTTGACCTGACCCTGGAACCACTGTATTCTTGCCACCTTGGATGCTTCTGA

>Glyma.01g064200.3 sequence-type=CDS polypeptide=Glyma.01g064200.3.p locus=Glyma.01g064200 id=Glyma.01g064200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAGGGGTAAGGTACAGCTGAAGAGGATAGAGAACAAGATCAATCGCCAGGTAACTTTCTCCAAAAGGAGAAGTGGGTTGCTCAAGAAAGCTCATGAGATCTCTGTACTCTGTGATGCTGAGGTAGCTTTGATTGTCTTCTCTCACAAAGGAAAGCTCTTTGAGTATGCTACTGATTCATGCATGGAGAAGATACTGGAACGCCACGAAAGGTATGCCTATGCAGAGAGGCAGCTAGTAGCAAATGATTCTGAAACACAGGGAAACTGGACCATTGAATACACTAGACTGAAGGCAAAGATTGACCTTTTACAGAGAAACCACAGGCACTATATGGGAGAAGATTTGGCTTCAATGAGCCTCAAAGAGCTTCAGAGTTTGGAGCAGCAGTTGGATACTGCTATCAAAAACATCCGCACAAGGAGGAATGATCTCATGTACGCTTCCATTTCTGAGCTTCAAAAAAAGGAGAAAATGATACAAGAGCAGAATAACATCCTTGCAAAGAAGATCAAGGAGAAAGAGCAGGCAGTAGCACAGCAAGCTGCACAATGGGAGCAGCCAAACTACAGGGTTGATACATCTTTCATGCCACAGCAGCAACCCCTTCGCACCAGTTTGAACATAGGGTCTAATTTTGTTTGTGCAGCGGCAATAATTACAATCAGGAAGCTGCACCAGAACTAG
Predicted protein sequences of Glyma.01G064200
>Glyma.01g064200.1.p sequence-type=predicted peptide transcript=Glyma.01g064200.1 locus=Glyma.01g064200 id=Glyma.01g064200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATDSCMEKILERHERYAYAERQLVANDSETQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLASMSLKELQSLEQQLDTAIKNIRTRRNDLMYASISELQKKEKMIQEQNNILAKKIKEKEQAVAQQAAQWEQPNYRVDTSFMPQQQPLRTSLNIGGNNYNQEAAPELGRNGLDLTLEPLYSCHLGCF*

>Glyma.01g064200.3.p sequence-type=predicted peptide transcript=Glyma.01g064200.3 locus=Glyma.01g064200 id=Glyma.01g064200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATDSCMEKILERHERYAYAERQLVANDSETQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLASMSLKELQSLEQQLDTAIKNIRTRRNDLMYASISELQKKEKMIQEQNNILAKKIKEKEQAVAQQAAQWEQPNYRVDTSFMPQQQPLRTSLNIGSNFVCAAAIITIRKLHQN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo