|
A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G10480.3 | AT | Protein-tyrosine phosphatase-like, PTPLA | JGI | N/A | IEA |
| GO:0006629 | GO-bp | lipid metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0006631 | GO-bp | fatty acid metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0006633 | GO-bp | fatty acid biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0005783 | GO-cc | endoplasmic reticulum | EnsemblGenomes | N/A | IEA |
| GO:0005789 | GO-cc | endoplasmic reticulum membrane | EnsemblGenomes | N/A | IEA |
| GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
| GO:0016829 | GO-mf | lyase activity | EnsemblGenomes | N/A | IEA |
| GO:0102158 | GO-mf | very-long-chain 3-hydroxyacyl-CoA dehydratase activity | EnsemblGenomes | N/A | IEA |
| GO:0102343 | GO-mf | 3-hydroxy-arachidoyl-CoA dehydratase activity | EnsemblGenomes | N/A | IEA |
| GO:0102344 | GO-mf | 3-hydroxy-behenoyl-CoA dehydratase activity | EnsemblGenomes | N/A | IEA |
| GO:0102345 | GO-mf | 3-hydroxy-lignoceroyl-CoA dehydratase activity | EnsemblGenomes | N/A | IEA |
| PTHR11035 | Panther | PTPLA DOMAIN PROTEIN | JGI | N/A | IEA |
| PTHR11035:SF14 | Panther | JGI | N/A | IEA | |
| PF04387 | PFAM | Protein tyrosine phosphatase-like protein, PTPLA | JGI | N/A | IEA |
| PWY-5080 | SoyCyc9 | very long chain fatty acid biosynthesis I | Plant Metabolic Network | ISS | |
| PWY-7036 | SoyCyc9 | very long chain fatty acid biosynthesis II | Plant Metabolic Network | ISS | |
| GN7V-65630 | SoyCyc9-rxn | Enzyme name not determined | Plant Metabolic Network | ISS |
|
Glyma.01G023400 not represented in the dataset |
Glyma.01G023400 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.01g023400 | Wm82.a4.v1 | ISS | As supplied by JGI |
>Glyma.01g023400.1 sequence-type=CDS polypeptide=Glyma.01g023400.1.p locus=Glyma.01g023400 ID=Glyma.01g023400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCGGGTTTTTTCTCCCTTCTCAGACGCCTCTACCTCACCGCCTACAACTTCACCTTCTTCTTTGCCGATTTACACAAGCCTTTGCTTTTTGCCCAAACCGCGGCTGTGCTTGAGATTCTTCATGGTATAGTAGGGCTGGTGCGGTCTCCAGTAACAGCAACCTTTCCACAGATAGGTTCGAGGTTGTTCCTGGCTTGGGGTATCTTGTGCTTGTTACCTCCCTATCAATCAGCTGGTCTATCACCGAGTCCTCATGAGATTTTGGATCAGTTTCGCCATTGTCTTGTACATGAATGA
>Glyma.01g023400.1.p sequence-type=predicted peptide transcript=Glyma.01g023400.1 locus=Glyma.01g023400 ID=Glyma.01g023400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MAGFFSLLRRLYLTAYNFTFFFADLHKPLLFAQTAAVLEILHGIVGLVRSPVTATFPQIGSRLFLAWGILCLLPPYQSAGLSPSPHEILDQFRHCLVHE*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||