SoyBase Expression Explorer

Tissue and developmental expression pattern of Glyma14g17903

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g17903 not represented in the dataset	Glyma14g17903 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome
Glyma14g17903 not represented in the dataset
Danzer et al. 2015, Plant Phys 168(3):1025-10352. > Down-Regulating the Expression of 53 Soybean Transcription Factor Genes Uncovers a Role for SPEECHLESS in Initiating Stomatal Cell Lineages During Embryo Development	Pelletier et al. 2017, PNAS DOI:/10.1073/pnas.1707957114 > LEC1 sequentially regulates the transcription of genes involved in diverse developmental processes during seed development

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RNAseq tissue, developmental and treatment expression patterns of Glyma14g17903

All values in RPMK or FPMK

GSE57349

Williams 82 Globular stage embryo	Williams 82 Globular stage embryo	Williams 82 Globular stage endosperm	Williams 82 Globular stage seed coat endothelium	Williams 82 Globular stage seed coat epidermis	Williams 82 Globular stage seed coat hilum	Williams 82 Globular stage seed coat inner integument	Williams 82 Globular stage seed coat outer integument	Williams 82 Globular stage suspensor
0	0, 0	0, 0, 0	0, 0, 0	0, 0, 0	0.0563179, 0, 0	0, 0, 0, 0	0, 0, 0	0.137223, 0, 0

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GSE57606

Williams 82 Cotyledon stage embryo	Williams 82 Cotyledon stage embryo axis	Williams 82 Cotyledon stage embryo cotyledon	Williams 82 Cotyledon stage endosperm	Williams 82 Cotyledon stage seed coat endothelium	Williams 82 Cotyledon stage seed coat epidermis	Williams 82 Cotyledon stage seed coat hilum	Williams 82 Cotyledon stage seed coat inner integument	Williams 82 Cotyledon stage seed coat outer integument	Williams 82 Cotyledon stage suspensor
0, 0, 0	0, 0, 0	0, 0, 0	0, 0, 0	0, 0, 0	0, 0, 0.110243	0, 0, 0	0, 0, 0	0, 0, 0	0, 0, 0

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GSE61857

Williams 82 Cotyledon Stage1	Williams 82 Cotyledon Stage2	Williams 82 Cotyledon Stage3	Williams 82 Leaf Stage1	Williams 82 Leaf Stage3	Williams 82 Leaf Stage5	Williams 82 Leaf Stage7	Williams 82 Leaf Stage8
1, 1, 1	1, 1, 1	1, 1, 1	1, 1, 1	1, 1, 1	1, 1, 1	1, 1, 1	1, 1, 1

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Affymetrix SoyChipI tissue, developmental and treatment expression patterns of Glyma14g17903

All values in intensity units

Glyma14g17903 is not represented on the SoyChip

Download query results HERE

Most RNAseq experiments utilized Wm82.a1 gene models whereas all of the Affymetrix SoyChip experiments were mapped to Wm82.a1 gene models. This means that if your query utilized a Wm82.a2 gene model name you probably will receive little to no results. If you did use a Wm82.a2 gene model name (Glyma.01g010000 for example), you will need to convert your Wm82.a2 gene model name to it's Wm82.a1 corresponding name using the SoyBase gene model correspondence tool. Once you have converted your gene model name you can re-run the Expression Explorer page and paste in the Wm82.a1 corresponding gene model ID into the input box on that page.

To convert your gene model ID click the SUBMIT button below

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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