SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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Glyma.08g050100 not represented in the dataset |
Glyma.08g050100 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
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Glyma.08g050100 not represented in the dataset |
Glyma.08g050100 not represented in the dataset |
| Danzer et al. 2015, Plant Phys 168(3):1025-10352. > Down-Regulating the Expression of 53 Soybean Transcription Factor Genes Uncovers a Role for SPEECHLESS in Initiating Stomatal Cell Lineages During Embryo Development |
Pelletier et al. 2017, PNAS DOI:/10.1073/pnas.1707957114 > LEC1 sequentially regulates the transcription of genes involved in diverse developmental processes during seed development |
Click picture to see a full size image
| Fiskeby III 25 ppb ozone 5 hr exposure | Fiskeby III 25 ppb ozone 5:40 hr exposure | Fiskeby III 25 ppb ozone 6:20 hr exposure | Fiskeby III 75 ppb ozone 5:40 hr exposure | Fiskeby III 75 ppb ozone 6:20 hr exposure | Fiskeby III 75 ppb ozone 7:00 hr exposure | Mandarin-Ottawa 25 ppb ozone 5 hr exposure | Mandarin-Ottawa 25 ppb ozone 7:00 hr exposure | Mandarin-Ottawa 75 ppb ozone 5:40 hr exposure | Mandarin-Ottawa 75 ppb ozone 6:20 hr exposure | Mandarin-Ottawa 75 ppb ozone 7:00 hr exposure |
| 5.89 | 6.92 | 8.89 | 7.19 | 9.04 | 10.04 | 5.89 | 12.08 | 8.91 | 8.56 | 7.29 |
| Clark 18a k1 black saddle | Clark 18a k1 yellow saddle | Clark 8 K1 black saddle | Clark 8 K1 yellow sectors |
| 6.98, 6.84 | 6.16, 8.26 | 8.86, 8.22, 8.18 | 10.24, 9.91, 8.02 |
| Glyma.08g050100 is not represented on the SoyChip |
Download query results HERE
Most RNAseq experiments utilized Wm82.a1 gene models whereas all of the Affymetrix SoyChip experiments were mapped to Wm82.a1 gene models. This means that if your
query utilized a Wm82.a2 gene model name you probably will receive little to no results. If you did use a Wm82.a2 gene model name (Glyma.01g010000 for example),
you will need to convert your Wm82.a2 gene model name to it's Wm82.a1 corresponding name using the SoyBase gene model correspondence tool. Once you have
converted your gene model name you can re-run the Expression Explorer page and paste in the Wm82.a1 corresponding gene model ID into the input box on that page.
To convert your gene model ID click the SUBMIT button below
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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