---

Click Here to View Full List of GWAS QTL

GWAS Report for Seed protein 7

Experimental Details

Number of germplasm analyzed	219
Number of loci tested	292,053
Platform name	355_K SoySNP
Platform details	NJAU 355_K SoySNP array

Publication for This Experiment

The genetic architecture of water-soluble protein content and its genetic relationship to total protein content in soybean
(Zhang et al. 2017c)

Scientific Reports 2017, 7:5636
10.1038/s41598-017-05922-9

Controlled vocabulary terms associated with the QTL Family

SoyBase	SOY:0002216

GWAS QTL

The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.

GWAS QTL name	Original name	Associated locus	R2	Candidate gene	Chromosome	Linkage Group
Seed protein 7-g1	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93995056	0.229	Glyma.03G156100	Gm03	N
Seed protein 7-g2	AX-94274580	ss715587774	0.292		Gm20	I
Seed protein 7-g3	AX-93920058	ss715588690	0.227	Glyma.04G157500	Gm04	C1
Seed protein 7-g4	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-94012201	0.174	Glyma.05G070600	Gm05	A1
Seed protein 7-g5	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93731783	0.269	Glyma.06G220300	Gm06	C2
Seed protein 7-g6	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93764734	0.258	Glyma.09G087200	Gm09	K
Seed protein 7-g7	Water-soluble	AX-93933852	0.254	Glyma.10G177000	Gm10	O
Seed protein 7-g8	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-94089116	0.258		Gm11	B1
Seed protein 7-g9	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93795201	0.259	Glyma.11G234600	Gm11	B1
Seed protein 7-g10	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93804391	0.26	Glyma.12G179700	Gm12	H
Seed protein 7-g11	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-94109235	0.22	Glyma.13G123500	Gm13	F
Seed protein 7-g12	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93822697	0.032	Glyma.14G086300	Gm14	B2
Seed protein 7-g13	AX-93649790	ss715623059	0.292	Glyma.15G098100	Gm15	E
Seed protein 7-g14	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-93837099	0.226	Glyma.15G138200	Gm15	E
Seed protein 7-g15	Warning: Undefined array key "other_name" in /var/www/html/GWAS/index.php on line 307	AX-94136114	0.258	Glyma.15G175200	Gm15	E
Seed protein 7-g16	Water-soluble	AX-94196006	0.267	Glyma.19G236600	Gm19	L
Seed protein 7-g17	Water-soluble	AX-93961814	0.095		Gm01	D1a
Seed protein 7-g18	Water-soluble, AX-94283226	ss715597283	0.049	Glyma.07G041800	Gm07	M
Seed protein 7-g19	Water-soluble	AX-94048210	0.193	Glyma.08G112300, Glyma.08G113400	Gm08	A2
Seed protein 7-g20	Water-soluble	AX-93795201	0.089	Glyma.11G234600	Gm11	B1
Seed protein 7-g21	Water-soluble, AX-94268787	ss715611919	0.038	Glyma.12G034900	Gm12	H
Seed protein 7-g22	Water-soluble	AX-93805526	0.123	Glyma.12G205100	Gm12	H
Seed protein 7-g23	Water-soluble	AX-94112235	0.11	Glyma.13G194400	Gm13	F
Seed protein 7-g24	Water-soluble, AX-93649393	ss715622517	0.058	Glyma.15G258100	Gm15	E
Seed protein 7-g25	Water-soluble	AX-94150758	0.03	Glyma.16G130900	Gm16	J
Seed protein 7-g26	Water-soluble	AX-94156641	0.123	Glyma.17G097800	Gm17	D2
Seed protein 7-g27	Water-soluble	AX-93870261	0.08	Glyma.18G071900	Gm18	G
Seed protein 7-g28	Water-soluble	AX-94170844	0.083	Glyma.18G126900	Gm18	G
Seed protein 7-g29	Water-soluble	AX-94182257	0.011	Glyma.18G276800	Gm18	G
Seed protein 7-g30	Water-soluble	AX-94198333	0.022	Glyma.20G031900	Gm20	I

---

Click Here to View Full List of GWAS QTL