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GWAS Report for Seed palmitic 1

Experimental Details

Number of germplasm analyzed	92
Number of loci tested	142

Publication for This Experiment

Association mapping of oil content and fatty acid components in soybean
(Priolli et al. 2015a)

Euphytica. 2015, 203(1):83-96
10.1007/s10681-014-1264-4

Supplemental data for the GWAS QTL
trait_associated_loci, R2_values

Controlled vocabulary terms associated with the QTL Family

SoyBase	SOY:0001673
CHEBI	CHEBI:15756
PO	PO:0009010
TO	TO:0000491

Other traits reported in this paper

• Seed oil 3
• Seed oleic 1
• Seed linoleic 1
• Seed linolenic 1

GWAS QTL

The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.

GWAS QTL name	Associated locus	R2	Chromosome	Linkage Group
Seed palmitic 1-g1	Satt429	0.329	Gm08	A2
Seed palmitic 1-g2	Satt168	0.158	scaffold_28	A2
Seed palmitic 1-g3	Satt294	0.227	Gm04	C1
Seed palmitic 1-g4	Satt129	0.087	Gm01	D1a
Seed palmitic 1-g5	Satt386	0.044	Gm17	D2
Seed palmitic 1-g6	Satt045	0.33	Gm15	E
Seed palmitic 1-g7	Satt334	0.303	Gm13	F
Seed palmitic 1-g8	Satt586	0.102	Gm13	F
Seed palmitic 1-g9	Satt303	0.109	Gm18	G
Seed palmitic 1-g10	Satt324	0.252	Gm18	G
Seed palmitic 1-g11	Satt270	0.054	Gm20	I
Seed palmitic 1-g12	Satt562	0.084	Gm20	I
Seed palmitic 1-g13	Satt571	0.095	Gm20	I
Seed palmitic 1-g14	Sat_144	0.005	Gm16	J
Seed palmitic 1-g15	Sat_224	0.088	Gm07	M
Seed palmitic 1-g16	Satt001	0.411	Gm09	K
Seed palmitic 1-g17	Satt196	0.329	Gm09	K
Seed palmitic 1-g18	Satt182	0.214	Gm19	L
Seed palmitic 1-g19	Satt229	0.235	Gm19	L
Seed palmitic 1-g20	Satt448	0.253	Gm19	L
Seed palmitic 1-g21	Satt540	0.153	Gm07	M
Seed palmitic 1-g22	Satt530	0.499	Gm03	N
Seed palmitic 1-g23	Satt345	0.421	Gm10	O
Seed palmitic 1-g24	Satt487	0.202	Gm10	O

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