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GWAS Report for Phytoph 1

Experimental Details

Number of germplasm analyzed	214
Number of loci tested	730
Platform name	SSR/Gel

Publication for This Experiment

Association mapping for partial resistance to Phytophthora sojae in soybean (Glycine max (L.) Merr.)
(Sun et al. 2014a)

J. Genet. 2014, 93(2):355-363
10.1007/s12041-014-0383-y

Controlled vocabulary terms associated with the QTL Family

SoyBase	SOY:0001716
TO	TO:0000439

GWAS QTL

The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.

GWAS QTL name	Associated locus	R2	Chromosome	Linkage Group
Phytoph 1-g1.1	Satt634	8.14	Gm02	D1b
Phytoph 1-g1.2	Satt634	7.00	Gm02	D1b
Phytoph 1-g2	Sat_222	6.66	Gm17	D2
Phytoph 1-g3	Satt301	5.24	Gm17	D2

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Click Here to View Full List of GWAS QTL