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Click Here to View Full List of GWAS QTL

GWAS Report for P use efficiency 2

Experimental Details

Number of germplasm analyzed	192
Number of loci tested	1536
Platform name	SSR/Gel

Publication for This Experiment

The Acid Phosphatase-Encoding Gene GmACP1 Contributes to Soybean Tolerance to Low-Phosphorus Stress
(Zhang et al. 2014a)

PLoS Genet 2014, 10(1): e1004061
10.1371/journal.pgen.1004061

Controlled vocabulary terms associated with the QTL Family

SoyBase	SOY:0002222
TO	TO:0001024

GWAS QTL

The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.

GWAS QTL name	Associated locus	R2	Chromosome	Linkage Group
P use efficiency 2-g1.1	Satt089	41.05	Gm08	A2
P use efficiency 2-g1.2	Sat_310	41.05	Gm08	A2
P use efficiency 2-g2.1	Sat_262	7.72	Gm13	F
P use efficiency 2-g2.2	Satt030	7.72	Gm13	F
P use efficiency 2-g3.1	Satt276	5.67	Gm05	A1
P use efficiency 2-g3.2	Sat_368	5.67	Gm05	A1
P use efficiency 2-g4.1	Sat_424	21.28	Gm14	B2
P use efficiency 2-g4.2	Satt063	21.28	Gm14	B2
P use efficiency 2-g5.1	Satt436	8.2	Gm01	D1a
P use efficiency 2-g5.2	Sat_343	8.2	Gm01	D1a
P use efficiency 2-g5.3	Sat_346	6.75	Gm01	D1a
P use efficiency 2-g6.1	Sat_191	7.05	Gm19	L
P use efficiency 2-g6.2	Satt313	7.05	Gm19	L
P use efficiency 2-g7.1	Sat_185	26.06	Gm18	G
P use efficiency 2-g7.2	Satt012	26.06	Gm18	G
P use efficiency 2-g8.1	Sat_352	7.54	Gm09	K
P use efficiency 2-g8.2	Satt138	7.54	Gm18	G

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Click Here to View Full List of GWAS QTL