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GWAS Report for Node number 2
Experimental Details
Number of germplasm analyzed | 208 |
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Number of loci tested | 3150387 |
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Platform name | GBS |
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Platform details | Illumina HiSeq 2500 |
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Publication for This Experiment
Combined Linkage Mapping and BSA to Identify QTL and Candidate Genes for Plant Height and the Number of Nodes on the Main Stem in Soybean
(Li et al. 2020)
Li et al., Int. J. Mol. Sci. (2020) 21:42
10.3390/ijms21010042
Controlled vocabulary terms associated with the QTL Family
Other traits reported in this paper
Comments
Multiple years, BLUE values used across years
GWAS QTL
The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.
GWAS QTL name | Original name | LOD | Chromosome | Linkage Group |
Node number 2-g1 | qMS-k-1 | 12.19 | Gm09 | K |
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Only BLUE values reported, see paper for individual years, only QTL ranges reported |
Node number 2-g2 | qMS-h-2 | 5.42 | Gm13 | H |
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Only BLUE values reported, see paper for individual years, only QTL ranges reported |
Click Here to View Full List of GWAS QTL