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GWAS Report for Leaflet number 1

Experimental Details

Number of germplasm analyzed	200
Platform name	GBS
Platform details	Illumina HiSeq 2500

Publication for This Experiment

Genetic map construction and QTL analysis of leaf-related traits in soybean under monoculture and relay intercropping
(Liu et al. 2019)

Liu et al. (2019) Sci Rep, 9: 2716
/10.1038/s41598-019-39110-8

Controlled vocabulary terms associated with the QTL Family

SoyBase	SOY:0001388
PO	PO:0020049
TO	TO:0002636

Other traits reported in this paper

• Leaflet area 1
• Specific leaflet area 1
• Specific leaflet weight 1
• Leaflet dry weight 1
• Leaflet dry weight ratio 1

Comments

Multiple years studied. Multiple growth conditions

GWAS QTL

The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.

GWAS QTL name	Original name	LOD	Chromosome	Linkage Group
Leaflet number 1-g1	qCLN17-3	6.72	Gm17	D2
Multiple years and treatments, Only 2015 monoculture shown, see paper for details

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